FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_ITSDve913.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_ITSDve913.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences254
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10039.37007874015748No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG9336.61417322834646No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC228.661417322834646No Hit
GGCTTGGTCATTTAGAGGAAGTAACACGCATCGATGAAGAACGCAGCCGC20.7874015748031495No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTCTCCGTAGGTG20.7874015748031495No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAGGGTTTCCGTAGGTG20.7874015748031495No Hit
ACGCCCAAGCAGATCTACAACGACCCGGCCAATCTGTTTGTGGCCAGCTT10.39370078740157477No Hit
ACGCCCAAGCAGATCTACATGGTACACTACCACGAAAGAGGTTCACTGTT10.39370078740157477No Hit
GGCTTGGTATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCAGTAGGTGA10.39370078740157477No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGACAGCAGCCGC10.39370078740157477No Hit
ACACCCAAGCAGATCTGCAACGACCCGGCCAATCTGTTTGTGGCCAGCTT10.39370078740157477No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTACGTAGGTG10.39370078740157477No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCCGTAGGT10.39370078740157477No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGCCGTAACAAGGTTTCCGTAGGTG10.39370078740157477No Hit
GGCTTGGTCATTTAGAGGAAGTAACTTGCATCGATGCAGAACGCAGCCGC10.39370078740157477No Hit
GGCTTGGTCATTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA10.39370078740157477No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATGACAAGGTTTCCGTAGGTG10.39370078740157477No Hit
GGCTTGGTAATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.39370078740157477No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGCAGACCGCAGCCGC10.39370078740157477No Hit
GGCTTGGTAATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG10.39370078740157477No Hit
GGCTTGGTCATTTAGAGGAAGTATCTCGCATCGATGAAGAACGCAGCCGC10.39370078740157477No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGCAGAACGTAGCCGC10.39370078740157477No Hit
TGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.39370078740157477No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCCGCCGC10.39370078740157477No Hit
GGCTTTGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.39370078740157477No Hit
GGCTTGGTAATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG10.39370078740157477No Hit
GCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGACGAACGCAGCCGCT10.39370078740157477No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTATGTG10.39370078740157477No Hit
CGGCCAGGTATGTACATCGGGGATACCGACGACGGGTCGGGCTTGCATCA10.39370078740157477No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGATCGCAGCCGC10.39370078740157477No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG10.39370078740157477No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTCGGTG10.39370078740157477No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGTCGTCACAAGGTTTCCGTGGGTGA10.39370078740157477No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAATGTTTCCGTAGGTG10.39370078740157477No Hit
ACGCCCAAGCAGCTCTACAACGACCCGGCCCATCTGTTTGTGGCCAGCTT10.39370078740157477No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGCAGAACGCAGCCGC10.39370078740157477No Hit
GGCTTGGTCATTTATAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.39370078740157477No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA10.39370078740157477No Hit
GGATTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG10.39370078740157477No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)