FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_ITSDve886.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_ITSDve886.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53
Sequences flagged as poor quality0
Sequence length301
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG2750.943396226415096No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG47.547169811320755No Hit
ACGCCCAAGCAGATCTACATCACGGTAGTTGAGATCGGACTTCATAAGGT35.660377358490567No Hit
ACACCCAAGCAGATTTACATCACGGTAGTTGAGATCGGACTTCATAAGGT23.7735849056603774No Hit
ACACCCAAGCAGATCTACATCACGGTAGTTGAGATCGGACTTCATAAGGT23.7735849056603774No Hit
ACGCCCAAGCAGATTTACATCACGGTAGTTGAGATCGGACTTCATAAGGT11.8867924528301887No Hit
AGTCCCGCTATGTACATTGGCGATACCGACGACGGATCGGGCCTCCACCA11.8867924528301887No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAATAAGGTCTCCGTAGGTG11.8867924528301887No Hit
AGGCCTGCGATGTATATCGGGGACACCGACGACGGTTCCGGCCTCCACCA11.8867924528301887No Hit
ACGCCCCAGCAGATTTACATCACGGTAGTTGAGATCGGACTTCATAAGGT11.8867924528301887No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAGCAAGGTCTCCGTAGGTG11.8867924528301887No Hit
GGCTTGGTCATTTAGAGGATGTAAAAGTCGTAACAAGGTTTCCGTTGGTG11.8867924528301887No Hit
ACACCCAAGCAGATTTACATCATGGTAGTTGAGATCGGACTTCATAAGGT11.8867924528301887No Hit
CGACCCGGTATGTATATCGGCGATACCGACGACGGCTCGGGACTGCATCA11.8867924528301887No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG11.8867924528301887No Hit
GGCTTGGTAATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG11.8867924528301887No Hit
AGACCTGGAATGTACATAGGCGACACCGACGACGGCTCGGGCCTGCACCA11.8867924528301887No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGCAACAAGGTCTCCGTAGGTG11.8867924528301887No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTTGTAACAAGGTCTCCGTAGGTG11.8867924528301887No Hit
GGCTTGGTCATTTAGATGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG11.8867924528301887No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)