FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_ITSDve564.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_ITSDve564.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1334
Sequences flagged as poor quality0
Sequence length301
%GC45

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG90767.99100449775113No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG785.847076461769116No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG765.697151424287856No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTTGGTG292.1739130434782608No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG282.0989505247376314No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTATCCGTAGGTG201.4992503748125936No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTTCGTAGGTG80.5997001499250375No Hit
GGCTTGGTAATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG80.5997001499250375No Hit
GGCTTTGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG70.5247376311844079No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTT60.4497751124437781No Hit
GGCTTGGTCATTTATAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG60.4497751124437781No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGCCGTAACAAGGTTTCCGTAGGTG50.3748125937031484No Hit
GGCTTGGTCATTTAGATGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG50.3748125937031484No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAATGTTTCCGTAGGTG50.3748125937031484No Hit
GGATTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG50.3748125937031484No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGCAACAAGGTTTCCGTAGGTG50.3748125937031484No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTGGGTG40.29985007496251875No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTCCCGTAGGTG40.29985007496251875No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA40.29985007496251875No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAGCAAGGTTTCCGTAGGTG30.22488755622188905No Hit
GGCTTGGTAATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG30.22488755622188905No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTG30.22488755622188905No Hit
GGCTTGGTCATTTAGAGGAAATAAAAGTCGTAACAAGGTTTCCGTAGGTG20.14992503748125938No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGA20.14992503748125938No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCCTAACAAGGTTTCCGTAGGTG20.14992503748125938No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCAGTAGGTG20.14992503748125938No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA20.14992503748125938No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCACAACAAGGTTTCCGTAGGTG20.14992503748125938No Hit
GGCTTGGTCATTTAGAGGAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA20.14992503748125938No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACTAGGTTTCCGTAGGTG20.14992503748125938No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACGAGGTTTCCGTAGGTG20.14992503748125938No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTAGTAACAAGGTTTCCGTAGGTG20.14992503748125938No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGTCGTAACAAGGTTTCCGTAGGTGA20.14992503748125938No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTA20.14992503748125938No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGCG20.14992503748125938No Hit
GGCTTGGTCATTTAGAGGAAGTAAGAGTCGTAACAAGGTTTCCGTAGGTG20.14992503748125938No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTCACAAGGTTTCCGTAGGTGA20.14992503748125938No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)