FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_ITSDve503.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_ITSDve503.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1999
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG152276.13806903451726No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG1025.102551275637819No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG371.8509254627313656No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCAGTAGGTG190.9504752376188095No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG170.8504252126063032No Hit
GGATTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG160.80040020010005No Hit
GGCTTGGTAATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG120.6003001500750376No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA120.6003001500750376No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTACCGTAGGTG110.5502751375687844No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTAGTAACAAGGTTTCCGTAGGTG100.5002501250625313No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAATGTTTCCGTAGGTG70.3501750875437719No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTAACCGTAGGTG70.3501750875437719No Hit
GGCTTGGTCATTTAGATGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG60.3001500750375188No Hit
TGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG60.3001500750375188No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTATGTG60.3001500750375188No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTT50.25012506253126565No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTACGTAGGTG50.25012506253126565No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGCAGGTG50.25012506253126565No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTGGGTG50.25012506253126565No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGCTTCCGTAGGTG50.25012506253126565No Hit
GGCTTGGTCATTTAGAGTAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG40.2001000500250125No Hit
GGCTTGGTCATTTCGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG40.2001000500250125No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTTTCCGTAGGTG40.2001000500250125No Hit
GGCTTGGTCATTTAGAGGAAGTAAGAGTCGTAACAAGGTTTCCGTAGGTG40.2001000500250125No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAGCAAGGTTTCCGTAGGTG30.1500750375187594No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC30.1500750375187594No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACGAGGTTTCCGTAGGTG30.1500750375187594No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTTCGTAGGTG30.1500750375187594No Hit
GGCTTGGCCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG30.1500750375187594No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTCACAAGGTTTCCGTAGGTG30.1500750375187594No Hit
GGATTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG20.10005002501250625No Hit
GGATTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG20.10005002501250625No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGATG20.10005002501250625No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGCCGTAACAAGGTTTCCGTAGGTG20.10005002501250625No Hit
GGCTTGGTCATTTAGAGGAAGTAAAACTCGTAACAAGGTTTCCGTAGGTG20.10005002501250625No Hit
GGTTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG20.10005002501250625No Hit
GGGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGT20.10005002501250625No Hit
AGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG20.10005002501250625No Hit
GGCTTGGTCCTTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG20.10005002501250625No Hit
GGCTTGGTCATTTAGCGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG20.10005002501250625No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTTGTAACAAGGTTTCCGTAGGTG20.10005002501250625No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCTTAGGTG20.10005002501250625No Hit
GGCCTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG20.10005002501250625No Hit
GGCTTGGTCATTTATAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG20.10005002501250625No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTCCCGTAGGTG20.10005002501250625No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTTGGTG20.10005002501250625No Hit
GGCTTGGTCATTTAGAGGAAGTAACAGTCGTAACAAGGTTTCCGTAGGTG20.10005002501250625No Hit
GGCTTGGTCATTCAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG20.10005002501250625No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGCG20.10005002501250625No Hit
GGCTTTGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG20.10005002501250625No Hit
CGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG20.10005002501250625No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)