FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_ITSChi472.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_ITSChi472.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2183
Sequences flagged as poor quality0
Sequence length301
%GC49

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG69231.699496106275767No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG46021.07191937700412No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC24211.08566193311956No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG2069.436555199267064No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCAGCATCGATGAAGAACGC482.1988089784699953No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCATCGATGAAGAACGCAGC341.5574896930829134No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGCAGAACGCAGCCGC241.0994044892349977No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGACCGCAGCCGC231.0535959688502061No Hit
GGCTTGGTCATTTAGAGGAAGTAACTGCATCGATGAAGAACGCAGCCGCT160.7329363261566652No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAGGGTTTCCGTAGGTG150.6871278057718736No Hit
GGCTTGGTCATTTAGAGGAAGTATCTCGCATCGATGAAGAACGCAGCCGC120.5497022446174988No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGCG120.5497022446174988No Hit
GGCTTTGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG70.320659642693541No Hit
GGCTTGGTAATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG70.320659642693541No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTTGGTG70.320659642693541No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACGAGGTCTCCGTTGGTG60.2748511223087494No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTCTCCGTTGGTG60.2748511223087494No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGTCGTAACAAGGTCTCCGTTGGTGA60.2748511223087494No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGCCTCCGTTGGTG50.22904260192395787No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGCAGACCGCAGCCGC50.22904260192395787No Hit
GGCTTGGTCATTTAGAGGAAGTACGCAGCATCGATGAAGAACGCAGCCGC50.22904260192395787No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGTCGTAACAAGGTCTCCGTAGGTGA40.1832340815391663No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCATCGATGACGAACGCAGC40.1832340815391663No Hit
GGCTTTGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG40.1832340815391663No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGCCGTAACAAGGTCTCCGTAGGTG40.1832340815391663No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGCCTCCGTAGGTG40.1832340815391663No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGCAACAAGGTCTCCGTTGGTG30.1374255611543747No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTTGTG30.1374255611543747No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTTTCCGTAGGTG30.1374255611543747No Hit
GGCTTGGTAATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG30.1374255611543747No Hit
GGCTTGGTCATTTAGAGGAAGTAATCGTCGGCATCGCTGAAGAACGCAGC30.1374255611543747No Hit
GGCTTGGTAATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC30.1374255611543747No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGA30.1374255611543747No Hit
TGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG30.1374255611543747No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACGAGGTCTCCGTAGGTG30.1374255611543747No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTGACAAGGTCTCCGTTGGTG30.1374255611543747No Hit
GGCTTGGTCATTTAGAGGAAGTAACTGCATCGATGACGAACGCAGCCGCT30.1374255611543747No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTATCCGTTGGTG30.1374255611543747No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGA30.1374255611543747No Hit
GGCTTGGTCATTTATAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG30.1374255611543747No Hit
GGCTTGGTCATTTAGAGGAAGTAAGCAGCATCGATGAAGAACGCAGCCGC30.1374255611543747No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGCAACAAGGTTTCCGTAGGTG30.1374255611543747No Hit
GGCTTGGTCATTTAGAGGAATTAAAAGTCGTAACAAGGTTTCCGTAGGTG30.1374255611543747No Hit
GGCTTGGTCATTTAGATGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG30.1374255611543747No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)