FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_ITSATH375.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_ITSATH375.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8408
Sequences flagged as poor quality0
Sequence length301
%GC52

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG416049.476688867745004No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG237228.21122740247383No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTG6057.195528068506185No Hit
GGCTTGGTCATTTAGAGGAAGTAAAGGTCGTAACAAGGTCTCCGTAGGTG340.4043767840152236No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGCCGTAACAAGGTCTCCGTAGGTG280.3330161750713606No Hit
GGCTTGGTAATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG270.3211227402473834No Hit
GGATTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG250.2973358705994291No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAGCAAGGTCTCCGTAGGTG250.2973358705994291No Hit
GGCTTTGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG240.285442435775452No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGCCTCCGTAGGTG240.285442435775452No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA240.285442435775452No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGA230.27354900095147483No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAATGTCTCCGTAGGTG220.26165556612749763No Hit
GGCTTGGTCATTTAGAGGAAGTAAGAGTCGTAACAAGGTCTCCGTAGGTG210.24976213130352048No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAGGGTCTCCGTAGGTG190.22597526165556614No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCCCCGTAGGTG190.22597526165556614No Hit
GGCTTGGTCATTTAGAGGAAGTAACTCGCATCGATGAAGAACGCAGCCGC190.22597526165556614No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTTGGTG190.22597526165556614No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG180.21408182683158894No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGCG170.2021883920076118No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTCTCCGTAGGTG160.19029495718363465No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTATGTG150.17840152235965748No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTT150.17840152235965748No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGCAGGTG140.1665080875356803No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTAGTAACAAGGTCTCCGTAGGTG140.1665080875356803No Hit
GGCTTGGTCATTTATAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG140.1665080875356803No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGCG140.1665080875356803No Hit
GGCTTGGTAATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG130.15461465271170313No Hit
GGCTTTGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG130.15461465271170313No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCAGTAGGTG130.15461465271170313No Hit
GGCTTGGTCATTTATAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG130.15461465271170313No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTATCCGTAGGTG120.142721217887726No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACGAGGTCTCCGTAGGTG120.142721217887726No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGCAACAAGGTCTCCGTAGGTG120.142721217887726No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGCTTCCGTAGGTG120.142721217887726No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTGGGTG110.13082778306374881No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAGGGTTTCCGTAGGTG110.13082778306374881No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTGGGTG100.11893434823977164No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTATGTG90.10704091341579447No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACGAGGTTTCCGTAGGTG90.10704091341579447No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTGACAAGGTCTCCGTAGGTG90.10704091341579447No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTA90.10704091341579447No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTT90.10704091341579447No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTAGTAACAAGGTTTCCGTAGGTG90.10704091341579447No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)