FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_ITSATH295.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_ITSATH295.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7
Sequences flagged as poor quality0
Sequence length301
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCCCTTACGATGTTCCTGATTACGCATAACTGTAATTCAGCCCGCTAAT114.285714285714285No Hit
TACCCTTACGATGTTCCTGATTACGCATAACTGTAATTCAGCCCGCTAAT114.285714285714285No Hit
TACCCTTACGATGTTCCTGATTACGCGTCTCGTGGGCTCGAAGATTTCGT114.285714285714285No Hit
TACCCTTACGATGTTCCTGATTACGCATAAGGTGCGGTCAGCCCGCCTAA114.285714285714285No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG114.285714285714285No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAAGTCTCCGTAGGTG114.285714285714285No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGCTTCCGTGGGTG114.285714285714285No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)