FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_ITS-OODve895.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_ITS-OODve895.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences724
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA17123.61878453038674No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT14620.165745856353592No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT13618.784530386740332No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA588.011049723756907No Hit
CGGAAGGATCATTACCACGAGCAGCAGTGGATGTCTAGGCTCTGTCTCTT354.834254143646409No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGTCAGAAAT91.2430939226519337No Hit
CGGAAGGATCATTACCACGAGCAGCAGTGGATGTCTCGGCTCTGTCTCTT40.5524861878453038No Hit
CGGAAGGATCATTACCCCACCAAAAACAATCCACGTGAACCGTCAGAAAT30.4143646408839779No Hit
ACGCCCAAGCAGATTTACATCACGGTAGTTGAGATCGGACTTCATAAGGT30.4143646408839779No Hit
CGGAAGGATCATTACCACGAGCAGCAGTGGCTGTCTAGGCTCTGTCTCTT30.4143646408839779No Hit
CGGAAGGATTATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT20.2762430939226519No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAACA20.2762430939226519No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT20.2762430939226519No Hit
CGGAAGGATCATTACCACACCAAAAAACCATCCACGTGAACCGTTAAACA20.2762430939226519No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA20.2762430939226519No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTCTTTAT20.2762430939226519No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAC20.2762430939226519No Hit
CGGAAGGATCATTATCACACCAAAAAACTATCCACGTGAACCGTTAAACA20.2762430939226519No Hit
CGGAAGGATCATTACCACGACACAGCAGTGGATGTCTAGGCTCTGTCTCT20.2762430939226519No Hit
CGGAAGGATCATTACCACGGGACAGCAGTGGATGTCTAGGCTCTGTCTCT20.2762430939226519No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCCCTGTCTCTTA20.2762430939226519No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGCTCTT20.2762430939226519No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTTAACCGTCAGAAAT20.2762430939226519No Hit
CTGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA20.2762430939226519No Hit
CGGAAGGATCATTACCACACCAAAGACAATCCACGTGAACCGTCAGAAAT20.2762430939226519No Hit
CGGAAGGATCATTACCACACCAAAAAATTATCCACGTGAACCGTTAAACA20.2762430939226519No Hit
ACACCCAAGCAGATTTACATCACGGTAGTTGAGATCGGACTTCATAAGGT20.2762430939226519No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA20.2762430939226519No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCG10.13812154696132595No Hit
CGGAAGGATCATTACCAAAAGCAGCAGTGGATGTCTAGGCTCTGTCTCTT10.13812154696132595No Hit
CGGAAGGATCATTACTACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.13812154696132595No Hit
CGGAAGGATTATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA10.13812154696132595No Hit
CGTCCAGGGATGTATATCGGCGACACCTCCGACGGCACGGGCCTGCACCA10.13812154696132595No Hit
CGGAAGGATCATTACCACGACAAAAAACTATCCACGTGAACCGTTAAACA10.13812154696132595No Hit
CGGAAGGATCATTACCACTACAGCAGTGGATGTCTAGGCTCTGTCTTTAT10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAAACCTATCCCCGTGAACCGTTAAACT10.13812154696132595No Hit
CGGAATGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA10.13812154696132595No Hit
CGGAAGGATCATTACCACGAGCAGCAGTGGATGTCTAGGCTATGTCTCTT10.13812154696132595No Hit
AGCCCCGCTATGTACATCGGCTCGACCGGCACCCGCGGCCTCCACCACCT10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAACCA10.13812154696132595No Hit
CGGAAGGATTATTACACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.13812154696132595No Hit
CGGAAGGATCATTACCACGAGCAGCAGTGGATGTCTAGGCTCTGTCTATT10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTCAGAAAT10.13812154696132595No Hit
CAGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCAACGTGAACTGTTAAACA10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAGAAAACTATCCACGTGAACCGTTAAACA10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAATAACAATCCACGTGAACCGTCAGAAAT10.13812154696132595No Hit
CGGAAGGATCATTACCAAGAGCAGCAGTGGATGTCTAGGCTCTGTCTCTT10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAAAAATATCCACGTGAACCGTCAGAAA10.13812154696132595No Hit
CGGAAGGATCATTACCACGAGCAGCAGTGGATGTCTAGGCTCTGTCCTTA10.13812154696132595No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTATGTATCT10.13812154696132595No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGAAGTCTAGGCTCTGTCTAT10.13812154696132595No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG10.13812154696132595No Hit
CGGAAGGATCATTACCACCAAAAAACTATCCACGTGCACCGTTAAACAAG10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCCCGTGAACCGTCAGAAAT10.13812154696132595No Hit
CGGAAGGATCATTACCACGAGAAGCAGTGGATGTCTAGGCTCTGTCTCTT10.13812154696132595No Hit
CGGAAGGAGCATTACCACCAGCAGTGGACGTCTAGGCCCTGTTTCTAATA10.13812154696132595No Hit
CGGAAGGATCATTACAACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.13812154696132595No Hit
AGGCCTGCAATGTACATTGGCGACACGTCCGACGGCACCGGCCTGCACCA10.13812154696132595No Hit
CGGAAGGATCATTACCACGAGCAGCAGTGGGGTCTAGGCTCTGTCTCTTA10.13812154696132595No Hit
CGGAAGGATCATTACCACGAGACAGCAGTTGGATGTCTAGGCTCTGTCTC10.13812154696132595No Hit
CGGAAGGATCATTACCACTAGCAGCAGTGGCTGTCTAGGCTCTGTCTCTT10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA10.13812154696132595No Hit
AGGCCTGCGATGTATATCGGCGATACCTCCGACGGTTCGGGCCTGCACCA10.13812154696132595No Hit
CGGAATGATCATTACCACGAGCAGCAGTGGATGTCTAGGCTCTGTCTCTT10.13812154696132595No Hit
CAGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.13812154696132595No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGCTCTGTCTCTT10.13812154696132595No Hit
CGGAAGGATCATTACCACACCTAAAACCATCCAACTGAACCGTCAGAAAT10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCTGAAAT10.13812154696132595No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG10.13812154696132595No Hit
CGGAAGGATCATTACCACGCGCAGCAGTGGATGTCTGGGCACTGTCTCTT10.13812154696132595No Hit
CGGAAGGACCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA10.13812154696132595No Hit
CGGAAGGATAATTACCACGAGCAGCAGTGGATGTCTCGGCTCTGTCTCTT10.13812154696132595No Hit
CGGAAGGATCATTACCGCCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA10.13812154696132595No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCCTCTGTCTCTT10.13812154696132595No Hit
CGAAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCGCGTGGACCGTTAAACA10.13812154696132595No Hit
CGTCCAGCAATGTATATCGGCGACACCGACGACGGCTCCGGCTTGCACCA10.13812154696132595No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGCCTCT10.13812154696132595No Hit
AGCCCGGCAATGTACATCGGCTCGACCGGTGAGCGCGGCCTGCACCACCT10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGCGAACCGTCAGAAAT10.13812154696132595No Hit
CGGAAGGATCACTACCACGAGCAGCAGTGGATGTCTAGGCTCTGTCTCTT10.13812154696132595No Hit
CGGAAGGATCATTACCACGAGCAACAGTGGATGTCTAGGCTCTGTCTCTT10.13812154696132595No Hit
AGGCCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG10.13812154696132595No Hit
CGGAAGGATCATTACCATGAGACAGCAGTGGGTGTCTAGGCTCTGTCTCT10.13812154696132595No Hit
CGGAAGGATCATTACCACGCCAAAAAACTATCCACGTGAACCGTTAAACA10.13812154696132595No Hit
CGGAAGGATCATTACCACGACAGCAGTTGATGTCTAGGCTCTGTCTCTTA10.13812154696132595No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.13812154696132595No Hit
CGGAAGTATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAGAAACAATCCACGTGAACCGTCAGAAAT10.13812154696132595No Hit
CGGAAGGAGCATGACAAAACCAAAAACAATCCACGTGAACCGTCAGAAAT10.13812154696132595No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCC10.13812154696132595No Hit
AGTCCGGGCATGTATATAGGCGACACCGACGATGGCTCCGGCCTCCACCA10.13812154696132595No Hit
CGGAAGGATCATTACCACGACAGCAGCGGATGTCGAGGCTCTGTCTCTTA10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGCTAAACA10.13812154696132595No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGACCCTGTCTCTTA10.13812154696132595No Hit
CGGAAGGATCATTACCACAAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.13812154696132595No Hit
CGGAAGGATCATTACACACCAAAAAACTATCTACGTGAACCGTTAAACAA10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAAGACTATCCACGTGAACCGTTAAACA10.13812154696132595No Hit
CGGAAGGATCATTACCACGAGAAAGCAGTGGATGTCTAGGCTCTGTCTCT10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGACCGTCAGAAATA10.13812154696132595No Hit
CGGAAGGATCATTCCACACCAAAAACAATCCACGTGAACCGTCAGAAATA10.13812154696132595No Hit
CGGAAGGATCATTACCCCACCAAAAAACTATCCACGTGAACCGTTAAACA10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTTAACCGTTAAACA10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAGT10.13812154696132595No Hit
CGGAAGGATCATTACCACGAGCAGCAGTGGATGTCTAGGCTCAGTCTCTT10.13812154696132595No Hit
CGGAAGTATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGTACCGTTAAACA10.13812154696132595No Hit
CGGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACAAGA10.13812154696132595No Hit
CGTCCCGTCATGTACATCGGCGGCACCGACGAGCGGGCGCTGCACCATCT10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAGAACTATCCACGTGAGCCGTTAAACA10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAAACAACCCACGTGAACCGTCAGAAAT10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAAAACTATACACGTGAACCGTTAAACA10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAAAAATATCCACGTGAACCGTTAAACA10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAGAACAATCCACGTGAACCGTCAGAAAT10.13812154696132595No Hit
CGGAAGGATCATTACCACCAAAAAACTATCCACGTGAACCGTTAAACAAG10.13812154696132595No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTCCTTAT10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAAACAGTCCACGTGAACCGTCAGAAAT10.13812154696132595No Hit
CGTAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA10.13812154696132595No Hit
CGGAAGGATCATTACCAAGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.13812154696132595No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTTCGTAGGTG10.13812154696132595No Hit
AGGCCAGGGATGTATATCGGCTCGACCGGTGTGCGCGGCCTGCACCACCT10.13812154696132595No Hit
CGGAAGGATCATTACCACATTCTGACGCTGCCGACGACCAGCAGTGGATG10.13812154696132595No Hit
CGGAAGGATCATTACCACGAAAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.13812154696132595No Hit
CGGAAGGATCATTACCCGAGCAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.13812154696132595No Hit
AGGAAGGATCATTACCAGACCAAAAAAACTATCCACGTGAACCGTCAAAA10.13812154696132595No Hit
CGGAAGGATCATTACCACACAAAAAAACTATCCACGTGAACCATTAAACA10.13812154696132595No Hit
CGGAAGGATCATACCACGACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT10.13812154696132595No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGTCCTGTCTTT10.13812154696132595No Hit
GGAAGGATCATTACCACGAGCAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.13812154696132595No Hit
CGGAAGGATCATTCCACGAGACAGCAGTGGATGTCTAGGCTCTGCCTCTT10.13812154696132595No Hit
CGGAAGGACATTACCACGAGCAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.13812154696132595No Hit
CGGAAGGATCATTACCGCACCAAAAACAATCCACGTGAACCGTCAGAAAT10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGCGAACCGTTAAACA10.13812154696132595No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTTCTCTT10.13812154696132595No Hit
CGGAAGGATCATTCCCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.13812154696132595No Hit
CGCCCCGCAATGTATATTGGCGACACCGACGACGGCTCCGGCCTCCACCA10.13812154696132595No Hit
CGGAAGGATCATTACCACGAGACAGCAGTTGATGTCTAGGCTCTGTCTCT10.13812154696132595No Hit
CGCCCTGGCATGTATATAGGCGATACAGACGACGGTAGCGGTCTGCATCA10.13812154696132595No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTATGTCTCT10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGGGAACCGTCAGAAAT10.13812154696132595No Hit
CGGAAGGATCATTACCATGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.13812154696132595No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTAAACAA10.13812154696132595No Hit
CGGAAGGATCATTACCATGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.13812154696132595No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTATCTTA10.13812154696132595No Hit
CGTAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT10.13812154696132595No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTTTAGGCTCTGTCTCTTA10.13812154696132595No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTCTTTTA10.13812154696132595No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)