FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_ITS-OODve853.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_ITS-OODve853.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10137
Sequences flagged as poor quality0
Sequence length301
%GC45

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA651164.23004833777252No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTT9249.115122817401598No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA2532.4958074380980566No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTG2512.4760777350300875No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGACTCTGTACTT1391.3712143632238334No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA870.8582420834566441No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT680.6708099043109401No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT600.5918910920390648No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTTAACCGTTAAACAA500.49324257669922067No Hit
CGGAAGGATCATTACCACACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT450.4439183190292986No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC450.4439183190292986No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTACATAC400.3945940613593765No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAACAA390.38472920982539216No Hit
CGGAATGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA360.3551346552234389No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCGTTAAACAA340.33540495215547006No Hit
CGGAAGTATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA340.33540495215547006No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAGCAA320.3156752490875012No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT300.2959455460195324No Hit
CGGAAGGATCATTACCACACCAAAAAACCTTACCACGTGAATCTGTACTT290.286080694485548No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGACTCTGTACTG290.286080694485548No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTAAACAA280.2762158429515636No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCGTTAAACAA270.2663509914175792No Hit
CTGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA270.2663509914175792No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCGTTAAACAA230.2268915852816415No Hit
CGGAAGGATAATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA230.2268915852816415No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCGTTAAACAAAC230.2268915852816415No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCGTTAAACAA210.20716188221367265No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCGTTAAACAA210.20716188221367265No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAG210.20716188221367265No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCGTTAAACAA210.20716188221367265No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGCGTGAACCGTTAAACAA200.19729703067968826No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCGTTAAACAA200.19729703067968826No Hit
CGGAAGGATCATTACAACACCAAAAACTATCCACGTGAACCGTTAAACAA190.18743217914570384No Hit
CGGAAGGATCATTACCACACCAAAAAACTTACCACGTGAATCTGTACTTT170.16770247607773503No Hit
CGGAAGGATCATTACCACACCAAAAACTGTCCACGTGAACCGTTAAACAA170.16770247607773503No Hit
CGGAAGGATCATTACCACACCAAAAACTATCAACGTGAACCGTTAAACAA170.16770247607773503No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAACCAA170.16770247607773503No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAATCTGTACTTTC150.1479727730097662No Hit
CGGAAGGATTATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA150.1479727730097662No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAGACAA150.1479727730097662No Hit
CGGAAGGATCATTACCACACCGAAAACTATCCACGTGAACCGTTAAACAA140.1381079214757818No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACGA140.1381079214757818No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACTGTTAAACAA130.12824306994179738No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTCGGCTCTGTCTCTT130.12824306994179738No Hit
CGTAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA130.12824306994179738No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCGTTAAACAA120.11837821840781297No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTAAACCGTTAAACAA120.11837821840781297No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA120.11837821840781297No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAGTTAAACAA110.10851336687382855No Hit
CGGAAGGATCATTACCAAACCAAAAACTATCCACGTGAACCGTTAAACAA110.10851336687382855No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)