FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_ITS-OODve849.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_ITS-OODve849.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences214
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA3415.887850467289718No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC2310.74766355140187No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT209.345794392523365No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCGTCAGCAGTGGATGTCTAGG125.607476635514018No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT115.14018691588785No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC52.336448598130841No Hit
CGGAAGGATCATTACCACTGCAGCAGTGGATGTCTAGGCTCTGTCTCTTA41.8691588785046727No Hit
CGGAAGGATCATTACCACTGGCAGCAGTGGATGTCTAGGCTCTGTCTCTT41.8691588785046727No Hit
CGGAAGGATCATTACCACCTGAGGCCGCGACAGCAGTGGATGTCTAGGCT31.4018691588785046No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCGTCAGCCGTGGATGTCTAGG31.4018691588785046No Hit
CGGAAGGATCATTACCACCCAGCAGTGGATGTCTAGGCTCTGTCTCTTAT31.4018691588785046No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACAACGCTGAATCTC31.4018691588785046No Hit
CGGAAGGATCATTACCACTGCTGCGACGACAGCAGTGGATGTCTAGGCTC20.9345794392523363No Hit
CGGAAGGATCATTACCACGTCGTCGGCCGCGTCAGCAGTGGATGTCTAGG20.9345794392523363No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTCGGCTCTGTC20.9345794392523363No Hit
CGGAAGGATCATTACCACACTGGTGCACAGCAGTGGATGTCTAGGCTCTG20.9345794392523363No Hit
CGGAAGGATCATTACCAAACCAAAAAACTATCCACGTGAACCGTTAAGCA20.9345794392523363No Hit
CGGGAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA20.9345794392523363No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA20.9345794392523363No Hit
CGGAAGGATCATTACCACGCCAAAAAACTATCCACGTGAACCGTTAAGCA20.9345794392523363No Hit
CGGAAGGATCATTACCATGAGACAGCAGTGGATGTCTAGGCTCTGTCGCT10.46728971962616817No Hit
CGGAAGGATCATTACCACATCTGACGTGCGCGACAGCAGTGGATGTCTAG10.46728971962616817No Hit
CGGAAGGATCATTACCACGTCTGACGCTGCCGACGGCAGCAGTGGATGTC10.46728971962616817No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCGTCAGCGGTGGATGTCTAGG10.46728971962616817No Hit
CGGAAGGATCATTACCGCGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT10.46728971962616817No Hit
CGGAAGGATCATTACCACATCTGACGCTGCGGCGCAGCAGTGGATGTCTA10.46728971962616817No Hit
CGGAAGGATCATTACCACTAGCTGCAGCAGTGGATGTCTAGGCTCTGTCT10.46728971962616817No Hit
CGGAAGGATCATTACCAAATCTGATGCTGCCGACGACAGCCGTGGATGTC10.46728971962616817No Hit
CGGAAGGATCATTACCACATCTGCGCTGCCAGCAGTGGATGTCTAGGCTC10.46728971962616817No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC10.46728971962616817No Hit
CGGAGGGATCATCACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA10.46728971962616817No Hit
CGGAAGGATCATTACCACACCTAAAAATTTTCCACGTGAACCGTACCAAC10.46728971962616817No Hit
CGGAAGGATCATTACCACAGATCGGACAGCAGTGGATGTCTAGGCTCTGT10.46728971962616817No Hit
CGGAAGGATCATTACCACGTCGTCGTCAGCGTCAGCAGTGGATGTCTAGG10.46728971962616817No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTCAAAAA10.46728971962616817No Hit
CGGAAGGATCATTACCACATCTGACGCTGCGACCAGCAGTGGATGTCTAG10.46728971962616817No Hit
CGGAAGGATCATTACCACTGGCAGCAGTGGCTGTCTAGGCTCTGTCTCTT10.46728971962616817No Hit
CGGAAGGATCATTACCACATCGACCTGCCAGCAGCAGTGGATGTCTAGGC10.46728971962616817No Hit
CGGAAGGATCACTACCACTCCGAGCCCACGAGACAACGCTGAATCTCGTA10.46728971962616817No Hit
CGGAAGGATCATTACCACGTCGTCTGCAGCGTCAGCAGTGTATGTCTAGG10.46728971962616817No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCG10.46728971962616817No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTTTCGCA10.46728971962616817No Hit
CGGAAGGATCATTACCACAGACGCTGCCGCGCAGCAGTGGATGTCTAGGC10.46728971962616817No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAGCAA10.46728971962616817No Hit
CGGAAGGATCATTACCACGTCTCCGGCCCACGAACAGCAGTGGATGTCTA10.46728971962616817No Hit
CGGAAGGATCATTACCACTGCAGCAGTGGATGTCTAGGCTCAGTCTCTTA10.46728971962616817No Hit
CGGAAGGATCATTACCACCTGAGGCCCCGACAGCAGTGGATGTCTAGGCT10.46728971962616817No Hit
CGGAAGGATCATTACCACTGCAGCAGTGGATGTCTAGGATCTGTCTCTTA10.46728971962616817No Hit
CGGAAGGATCATTACCACACCAAAAAAATATCCACGTGAACCGTTAAGCA10.46728971962616817No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC10.46728971962616817No Hit
CGGAAGGATCATTACCACGCTCCGAGCCCAGCAGTGGATGTCTAGGCTCT10.46728971962616817No Hit
CGGAAGGATCATTACCACATCTGCGCTGCCACGACAGCAGTGGATGTCTA10.46728971962616817No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTGGGCTCTGTCTCT10.46728971962616817No Hit
CGGAAGGATCATTACCAAGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.46728971962616817No Hit
CAGTGGATGTCTAGGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA10.46728971962616817No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCCCT10.46728971962616817No Hit
CGGAAGGATCATTACAACACCTAAAAACTTTTCACGTGAACCGTATCAAC10.46728971962616817No Hit
CGGAAGGATCATTACCACATCTGACGCTCCGACAACAGCAGTGGATGTCT10.46728971962616817No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGTCTCTGTCTCT10.46728971962616817No Hit
CGGAAGGATCATTACCACTGGCAGCAGTGGAGGTCTAGGCTCTGTCTCTT10.46728971962616817No Hit
CGGAAGGATCATTACCACATCTGACGTGCCGACGACAGCAGTGGATGTCT10.46728971962616817No Hit
CGGAAGGATCATTACCACACCGAAAAACTATCCACGTGAACCGTTAAGCA10.46728971962616817No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCTGGTA10.46728971962616817No Hit
CGGAAGGATCATTACCACTGTGTATAAGAGACAGCAGTTGCTGTCTAGGC10.46728971962616817No Hit
CGGAAGGATCATTACCACATCTGACGCAGCAGTGGATGTCTAGGCTCTGT10.46728971962616817No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGCAGTGGATGTCTAGGC10.46728971962616817No Hit
TGGAAGTATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA10.46728971962616817No Hit
CGGAAGGATAATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA10.46728971962616817No Hit
CGGAAGGGTCATTACCACGCCAAAAAACTATCCACGTGAACCGTTAAGCA10.46728971962616817No Hit
CGGAAGGATCATTACCACGTCGTCTGCAGCGTCAGCTGGGGATTTCTAGG10.46728971962616817No Hit
CGGAAGAATCATTACCACGTCGTCGGCAGCGTCAGCCGTGGATGTCTAGG10.46728971962616817No Hit
CGGAAGGACCATTACCACGTCGTCGGCAGCGTCAGCAGTGGATGTCTAGG10.46728971962616817No Hit
CGGAAGGATCATTACCACATCTGAGCTGCCACGACAGCAGTGGATGTCTA10.46728971962616817No Hit
CGGAAGGATCATTACCACGTCGTCGTCAGCAGTGGATGTCTAGGCTCTGT10.46728971962616817No Hit
CGGAAGGATCATTACCACTCCGATCAGCAGTGGATGTCTAGGCTCTGTCT10.46728971962616817No Hit
CGGAAGGATCATTACCACGAGACAGCAATGGATGTCTAGGCTCTGTCTCT10.46728971962616817No Hit
CGGAAGGATCATTACCACCAAAAAACTATCCACGTGAACCGTTAAGCAAA10.46728971962616817No Hit
CGGAAGGATCATTACCACCAAAAAACTATCCACGTGCACCGTTAAGCAAA10.46728971962616817No Hit
CGGAAGGATCATTACCACATCTCCGGCCCAGCAGTGGATGTCTAGGCTCT10.46728971962616817No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCATTGGATGTCTAGGCTCTGTC10.46728971962616817No Hit
CGGAAGGATCATTACCACTCGTCGGCAGGAGTGGATGTCTAGGCTCTGTC10.46728971962616817No Hit
CGGAAGGATCATTACCACACTCCGAGCTCAGCACTTGATTTCTATGCTCT10.46728971962616817No Hit
CGGAAGGATCATTACCACATCTGCGCAGCAGTGGATGTCTAGGCTCTGTC10.46728971962616817No Hit
CGGAAGGATCATTACCACTGTGTATAAGAGACAGCAGTGGATGTCTAGGC10.46728971962616817No Hit
CGGAAGGATCATTACCACCCAGCAGAGGATGTCTAGGCTCTGTCTCTTAT10.46728971962616817No Hit
CGGAAGGATAATTACCACTCGTCGGCAGCAGTGGATGTCTCGGCTCTGTC10.46728971962616817No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTATGTAT10.46728971962616817No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCTTCAGCAGTGGATGTCTAGG10.46728971962616817No Hit
CGGAAGGATCATTACCACTCTGAGCAACAGCAGTGGATGTCTAGGCTCTG10.46728971962616817No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTTTGTC10.46728971962616817No Hit
CGGAAGGATCATTACCACTGACGCTCCGCGCAGCAGTGGATGTCTAGGCT10.46728971962616817No Hit
CGGAAGTATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA10.46728971962616817No Hit
CGGAAGCATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA10.46728971962616817No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)