FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_ITS-OODve848.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_ITS-OODve848.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences569
Sequences flagged as poor quality0
Sequence length301
%GC47

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA13022.847100175746924No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT11620.38664323374341No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA417.205623901581721No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT264.569420035149385No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC244.21792618629174No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT193.3391915641476277No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTATCCACGTGAACCGTTAAT172.987697715289982No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC111.9332161687170473No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC91.5817223198594026No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGTCAGAAAT81.4059753954305798No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTATCCACGTGCACCGTTAAT61.054481546572935No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAATGA61.054481546572935No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTAATG50.8787346221441126No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAGAAA40.7029876977152899No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA40.7029876977152899No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAACCA30.5272407732864675No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGACCCGTTAAGC30.5272407732864675No Hit
CGGAAGGATCATTACCACATCTGACGCTGCGACGACAGCAGTGGATGTCT30.5272407732864675No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA30.5272407732864675No Hit
CGGAAGGATTATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA20.35149384885764495No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCCGTGGATGTCTAGGCTCTGT20.35149384885764495No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA20.35149384885764495No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTATCCACGTGAACCGTTAAC20.35149384885764495No Hit
CGGAAGGATCATTACCACGAGACCAGCCGTGGATGTCTAGGCTCTGTCTC20.35149384885764495No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAACCAA20.35149384885764495No Hit
CGGAAGTATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT20.35149384885764495No Hit
CGGAAGGAGCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT20.35149384885764495No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTAATGAA20.35149384885764495No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAACAA20.35149384885764495No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAATGAA20.35149384885764495No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACATGAACCGTCAGAAAT10.17574692442882248No Hit
CGGAAGGATCATTACCACGTCGTCGGCAACAGTGGATGTCTAGGCTCTGT10.17574692442882248No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAGCAA10.17574692442882248No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTAACA10.17574692442882248No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAATCTATCCACGTGAACCGTTAAACA10.17574692442882248No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG10.17574692442882248No Hit
CGGAAGGATCATACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTCT10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACAGTTAAACA10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGGAAT10.17574692442882248No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAATGGATGTCTAGGCTCTGT10.17574692442882248No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGCTAGGCTCTGTCTCTT10.17574692442882248No Hit
CGGAAGGATCATTACCACGCCAGAAACTATCCACGTGAACCGTTAACCAA10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGACCCGTTAATG10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTAAAC10.17574692442882248No Hit
AGGCCCGGCATGTATATAGGCGACACCGACGACGGATCGGGCCTGCACCA10.17574692442882248No Hit
CGAAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA10.17574692442882248No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTATCT10.17574692442882248No Hit
CGGAAGGATCATTACCAAACCTAAAAAACTATCCACGTGAACCGTTAAGC10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGCTATGAAT10.17574692442882248No Hit
CGGAAGGATCATTACCACGCCAAAAACAATCCACGTGAACCGTCAGAAAT10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACTGTTAAACA10.17574692442882248No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTCAGAAAT10.17574692442882248No Hit
CGGAAGGATCATTACCACACCTAAAAAATATCCACGTGAACCGTTAAACA10.17574692442882248No Hit
CGGAAGGATCATTACCACATCTGACGCTGCGACGAGAGCAGTGGATGTCT10.17574692442882248No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTAAACCGTTAACCAA10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAAACGATCCACGTGAACCGTTAAACA10.17574692442882248No Hit
CGGAAGGATCATTACAACGCCAAAAACTATCCACGTGAACCGTTAACCAA10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCGTTAACCAA10.17574692442882248No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCGGT10.17574692442882248No Hit
CGGAAGGATCATTACCACGAGACAGCAGGGGATGTCTAGGCTCTGTCTCT10.17574692442882248No Hit
CGGAAGGATCATTACCACGTCGTCGCCAGCAGTGGATGTCTAGGCTCTGT10.17574692442882248No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCCC10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAACAA10.17574692442882248No Hit
CGGAAGTATCATTACCACCAAAAAACTATCCACGTGAACCGTTAAACAAG10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGCGAACCGTTAACCA10.17574692442882248No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGCGGATGTCTAGGCTCTGT10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGGACCGTTAAACA10.17574692442882248No Hit
CGGAAGGATCATTACAACACCAAAAACTATCCACGTGAACCGTTAAGCAA10.17574692442882248No Hit
CTGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT10.17574692442882248No Hit
CGGAAGGATCATTAACACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.17574692442882248No Hit
TGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA10.17574692442882248No Hit
CGGAAGGATCATTACCACGAGACAAGCCGTGGATGTCTAGGCTCTGTCTC10.17574692442882248No Hit
CGTCCGGGCATGTATATTGGCGACACCGACGACGGGTCGGGCCTGCATCA10.17574692442882248No Hit
CGGAAGTATCATTACCACACCAAAAAACTATCCACGTGAACAGTTAAACA10.17574692442882248No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCTTTAATG10.17574692442882248No Hit
GGAAGGATCATTACCACGAGCCCAGCAGTGGATGTCTAGGCTCTGTCTCT10.17574692442882248No Hit
CGGAAGGATCATTACCACACCTGACGCTGCGACGACAGCAGTGGATGTCT10.17574692442882248No Hit
CGGAAGGATCATTACCACGCCAAAAAACTATCCACGTGAACCGTTAAACA10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAAAAAACTATCCACGTGACCCGTTAA10.17574692442882248No Hit
CGGAAGGATCATTACCACACCGAAAAACTATCCACGTGAACCGTTACATA10.17574692442882248No Hit
CTGAAGGATCATTACCACACCTAAAAAACTATCCACGTGACCCGTTAAAC10.17574692442882248No Hit
CGGAAGGATCATACCACACCAAAAAAAACTATCCACGTGAACCGTTAAAC10.17574692442882248No Hit
CGGAAGGATCATTACCACGAGGCCAGCAGTGGATGTCTAGGCTCTGTCTC10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGCTAAACA10.17574692442882248No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGACCCGTATTCA10.17574692442882248No Hit
CGGAAGGATCATTATCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.17574692442882248No Hit
CGGAAGGATCATTACCAAACCAAAAACAATCCACGTGAACCGTCAGAAAT10.17574692442882248No Hit
CGGAAGGATCATTACCACGTCGCCTGCAGCAGGGGATGTCTAGGCTCTGT10.17574692442882248No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCCCTGTCTC10.17574692442882248No Hit
CGGAAGGATCATTACCACTAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.17574692442882248No Hit
CGGAAGGATCATTACCACGCCAAAAGCTATCCACGTGAACCGTTAACCAA10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAGT10.17574692442882248No Hit
CGGAAGGATCATTACCACGAGACCAGCAGGGGATGTCTAGGCTCTGTCTC10.17574692442882248No Hit
CGGAAGGATCATTACCACACCTAAAAACCTATCCACGTGAACCGTTAAGC10.17574692442882248No Hit
CTGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT10.17574692442882248No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTCACCAA10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACT10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAACAACCCACGTGAACCGTCAGAAAT10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCGCGTGAACCGTTAAACA10.17574692442882248No Hit
CGGAAGGATATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAATA10.17574692442882248No Hit
CTGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA10.17574692442882248No Hit
CGGAAGGATCATTACCACACCTAAAACCATCCACGTTGACCGTTAGAAAT10.17574692442882248No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTA10.17574692442882248No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCGTTAACCAA10.17574692442882248No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTT10.17574692442882248No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGACGTCTAGGCCCTGTCTCT10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCAACGTGAACCGTTAAACA10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCATGTGAACCGTCAGAAAT10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAACAGTCCACGTGAACCGTCAGAAAT10.17574692442882248No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGGACCGTTAAGC10.17574692442882248No Hit
CGTAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA10.17574692442882248No Hit
CGGAAGGATCATTACAACACCAAAAAACTATCCACGTGAACCGTTAAACA10.17574692442882248No Hit
CGGAAGGATCATTATCACACCAAAAACAATCAACGTGAACCGTCAGAAAT10.17574692442882248No Hit
CGGAAGGATCATTACCAAGCCAAAAACTATCCACGTGAACCGTTAACCAA10.17574692442882248No Hit
CGGAGGATCATTACCACACCAAAAACAATCCACGTGCACCGTCAGAAATA10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAGCCGTTAAACA10.17574692442882248No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTTGTTG10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTATCAAC10.17574692442882248No Hit
CGGAAGGATCATTATCACACCAAAAACAATCCACGTGAACTGCCAGAAAT10.17574692442882248No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAAGCTCTGTCTC10.17574692442882248No Hit
CGGAAGTATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAACATTCCACGTGAACCGTCAGAAAT10.17574692442882248No Hit
CGGAAGGATAATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA10.17574692442882248No Hit
CGGAGGATCATTACCACGCCAAAAACTATCCACGTGCACCGTTAACCAAA10.17574692442882248No Hit
CGGAAGGATAATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGCCCCT10.17574692442882248No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCATTAACCAA10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAACACTCCACGTGAACCGCCAGAAAT10.17574692442882248No Hit
CGGAAGAATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTCAACCGTTAAACA10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTAAACCGTTAAACA10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTAAACAA10.17574692442882248No Hit
CGGAAGGATCATTACCGCACCTAAAAACTTTCCACGTGAACCGTATCAAC10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAAAACTCTCCACGTGAACCGTTAATG10.17574692442882248No Hit
CGGAAGGATCATTACCACGTCGTCGGCCGCAGTGGATGTCTAGGCTCTGT10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAGAACTATCCACGTGAACCGTTAAACA10.17574692442882248No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTGAGAAAT10.17574692442882248No Hit
CGGAAGGATCATTACCAAGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.17574692442882248No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)