FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_ITS-OODve841.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_ITS-OODve841.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences518
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT15229.343629343629345No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC13425.868725868725868No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT285.405405405405405No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT275.212355212355212No Hit
CGGAAGGATCATTACCACATCCAGCAGTGGATGTCTAGGCTCTGTCTCTT183.474903474903475No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA163.088803088803089No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCTTTGTA81.5444015444015444No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC71.3513513513513513No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACTGCTCGTAATCTC50.9652509652509652No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCTGGTA40.7722007722007722No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC30.5791505791505791No Hit
CGGAAGGATCATTACCACGTCGGCAGCAGTGGATGTCTAGGCTCTGTCTC30.5791505791505791No Hit
CGGAAGGATCATTACCACACCTAAAACCTTTCAACGTGAACCGTATCAAC30.5791505791505791No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACAGCCGTGGATGTC20.3861003861003861No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA20.3861003861003861No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA20.3861003861003861No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGCACCGTATCAACAA20.3861003861003861No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTGT20.3861003861003861No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAACA20.3861003861003861No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGCTTTGTAT20.3861003861003861No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCGCTTTGTAT20.3861003861003861No Hit
CTTCCTTCTCCTTCCCCCCCCCCCCCCTCTCCCCGTGAACCGCTTTGTAT20.3861003861003861No Hit
CGGAAGGATCATTACCACACCAAAAACTGTCCACGTGAACCGCTTTGTAT20.3861003861003861No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTATGTCTCT20.3861003861003861No Hit
CGGAAGGATCATTACCACTACAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.19305019305019305No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT10.19305019305019305No Hit
CTGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT10.19305019305019305No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGTATGTCTAGCCTCTGTCTCT10.19305019305019305No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTAGATGTCTAGGCTCTGTCTC10.19305019305019305No Hit
CGGAAGGATATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAACA10.19305019305019305No Hit
CGGAAGGATCATTACCACGAGACCATCCGTGGATGTCTAGGCTCTGTCTC10.19305019305019305No Hit
CGGAAGGATCATTACCACCAAAAACTATCCCCGTGAACCGCTTTGTATTG10.19305019305019305No Hit
CGGAAGGATCATTACCAAACATAAAAACTTTCCACGTGAACCGTATCAAC10.19305019305019305No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTCAA10.19305019305019305No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCCTTGTAT10.19305019305019305No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTAACCAA10.19305019305019305No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAC10.19305019305019305No Hit
CGGAAGGATCATTACACACCAAAAACTATCCACGTGAACCGCTTTGTATT10.19305019305019305No Hit
CGGAAGGAACATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.19305019305019305No Hit
CAGTGGATGTCTAGGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA10.19305019305019305No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAATCGTATCAAC10.19305019305019305No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACAGCAGTGGATGTC10.19305019305019305No Hit
CGGAAGGATCATTACCACAAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.19305019305019305No Hit
CGGAAGGATCATTACAACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.19305019305019305No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTCGTAT10.19305019305019305No Hit
CGGAAGGTCATTACCACGAGACAGCAGTGGACGTCTAGGCTCTGTCTCTT10.19305019305019305No Hit
CGGAAGGATCATTACCACACCAAAAACTATCGACGTGAACCGCTTTGTAT10.19305019305019305No Hit
CGGAAGGATCATTACCACGAGGCAGCAGTGGATGTCTAGGCTCTGTCTCT10.19305019305019305No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCGAC10.19305019305019305No Hit
CGGAAGGATCATTACCACGACAGTAGTGGATGTCTAGGCTCCTGTCTCTT10.19305019305019305No Hit
CGGAAGGATCATTACCACGAGACAGCCGTGGATGTCTAGGCTCTGTCTCT10.19305019305019305No Hit
CGGAATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC10.19305019305019305No Hit
CGGAAGGATCATACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA10.19305019305019305No Hit
CCGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.19305019305019305No Hit
AGACCTGGAATGTATAATGGCGACACCGACGACGGCTCTGGTCTGCACCA10.19305019305019305No Hit
CGGAAGGATCATTACCACGATACAGCAGTGGATGTCTAGGCTCTGTCTCT10.19305019305019305No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACCAGCCGTGGATGTCTAGG10.19305019305019305No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTATAT10.19305019305019305No Hit
CGGAAGGATCATTAAGACACCAAAAAGTATCCACGTGGACCGCTTTGTAT10.19305019305019305No Hit
CGGAAGGATCATTACCACATCCAGCAGTGGCTGTCTCGGCTCTGTCTCTT10.19305019305019305No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTTTAGGCTCTGTCTCT10.19305019305019305No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAC10.19305019305019305No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACCAGCAGTGGATGTCTAGG10.19305019305019305No Hit
CGGAAGGATCATTACCACATCCAGCAGTGGCTGTCTAGGCTCTGTCTCTT10.19305019305019305No Hit
CAGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT10.19305019305019305No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGATTTGTCTCT10.19305019305019305No Hit
CTGAAGGATCATTACCACATCCAGCAGTGGATGTCTAGGCTCTGTCTCTT10.19305019305019305No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTATGTAT10.19305019305019305No Hit
CGGAAGGATCATTACCACGAGACCAGCTGTGGATGTCTAGGCTCTGTCTC10.19305019305019305No Hit
GGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA10.19305019305019305No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTCCCTTA10.19305019305019305No Hit
CGGAATGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.19305019305019305No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCTCTTTGTAT10.19305019305019305No Hit
CGGAAGGATCATTACCAAACCAAAAACTATCCACGTGAACCGCTTTGTAT10.19305019305019305No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCGCTTTGTGT10.19305019305019305No Hit
CGGAAGGATCTTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA10.19305019305019305No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTATCAAC10.19305019305019305No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGGACCGCTTTGTA10.19305019305019305No Hit
CGGAAGGATCATTACCACAACTAAAAACTTTCCACGTGAACCGTATCAAC10.19305019305019305No Hit
AGGCCTGGAATGTATATAGGCGACACCCGCGACGGCTCCGGCCTCCACCA10.19305019305019305No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAC10.19305019305019305No Hit
CGTAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.19305019305019305No Hit
CTGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.19305019305019305No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCTACGTGAACCGTATCAAC10.19305019305019305No Hit
CGGAAGGATAATTACCAATCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT10.19305019305019305No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTCAAC10.19305019305019305No Hit
CAGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.19305019305019305No Hit
CGGAAGGATCATTACCACCACCAAAAACTATCCACGTGAACCGCTTTGTA10.19305019305019305No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTATATTA10.19305019305019305No Hit
AGTCCTGCCATGTATATAGGCTCGACGGGGATCCGCGGCCTGCACCACCT10.19305019305019305No Hit
CGGAAGGATCATTACCACACCTAATAACTTTCCACGTGAACCGTATCAAC10.19305019305019305No Hit
CGGAAGGATCATACCACACCAAGAACTATCCACGTGAACCGCTTTGTATT10.19305019305019305No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGTACCGCTTTGTAT10.19305019305019305No Hit
CGGAAGGATCATTACCATACCTAAAAACTTTCCACGTGAACCGTATCAAC10.19305019305019305No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC10.19305019305019305No Hit
CGGAAGGATCATTACCACGTCGGCAGCAGTGGATGTCTAGGCTCTGTTTC10.19305019305019305No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC10.19305019305019305No Hit
CGGAAGGATTATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT10.19305019305019305No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCATATCAAC10.19305019305019305No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACAAGACAGCCGTGGATGTC10.19305019305019305No Hit
CGGAATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGCATTGG10.19305019305019305No Hit
CCGTTTTCCGCCTACTGCGACTAAAGAGATTCAGTACCTTAACGCTAAAG10.19305019305019305No Hit
AGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.19305019305019305No Hit
CGGAAGGATCATTATCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.19305019305019305No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGCAT10.19305019305019305No Hit
CGGAAGGATCATTACCACATCTAGCAGTGGATGTCTAGGCTCTTTCCCTT10.19305019305019305No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC10.19305019305019305No Hit
CGGAAGGATCATTACCCCACCTAAAAACTTTCCACGTGAACCGTATCAAC10.19305019305019305No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCATGTGAACCGTATCAAC10.19305019305019305No Hit
CGGAAAGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTATCT10.19305019305019305No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC10.19305019305019305No Hit
CGGAAGGATCATTACTACACCAAAAACTATCCACGTGAACCGCTTTGTAT10.19305019305019305No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)