FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_ITS-OODve829.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_ITS-OODve829.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8161
Sequences flagged as poor quality0
Sequence length301
%GC47

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT351743.09520892047543No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA6828.356819017277296No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAACCGTTGTA6658.14851121186129No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA4295.256708736674427No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGTCAGAAAT1571.9237838500183801No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAAAA1391.7032226442837888No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTGTAAA1201.4704080382306088No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGCACCGTTGTA891.0905526283543683No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA831.017032226442838No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTTGTAAT540.6616836172037741No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA500.6126700159294204No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTG460.5636564146550668No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAATCAA450.5514030143364784No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGACCCGTCAAAA420.5146428133807132No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG380.4656292121063595No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTATCCACGTGAACCGTCAAA340.4166156108320058No Hit
CGGAAGGATCATTACCACACCAAAAAAAGCTTTCCACGTGAACCGTTGTA330.4043622105134175No Hit
CGGAAGGATCATTACCACACCAAAAAACACTTTCCACGTGAACCGTTGTA310.37985540987624067No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT290.35534860923906386No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC280.34309520892047546No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTAAACAA260.3185884082832986No Hit
CGGAAGGATCATTACCACGCCAAAAACAATCCACGTGAACCGTCAGAAAT250.3063350079647102No Hit
CGGAAGGATCATTACCACACCAAAAAAAAACTTTCCACGTGAACCGTTGT210.2573214066903566No Hit
CGGAAGGATCATTACCACACCAAAAAAACTCTCCACGTGAACCGTCAAAA210.2573214066903566No Hit
CGGAAGGATCATTACCACACCAAAAGCAATCCACGTGAACCGTCAGAAAT180.22056120573459137No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGGACCGTCAGAAAT180.22056120573459137No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTGTAATT170.2083078054160029No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT170.2083078054160029No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAGCAA170.2083078054160029No Hit
CGGAAGGATCATTACCACACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT160.19605440509741454No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGGAAT160.19605440509741454No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT150.1838010047788261No Hit
CGGAAGGATCATTACCACACCAAAAAACCTATCCACGTGAACCGTCAAAA140.17154760446023773No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTTAACCGTCAGAAAT140.17154760446023773No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAAAAAA140.17154760446023773No Hit
CGGAAGGATCATTACCACATCTCCCCAGCAGTGGATGTCTAGGCTCTGTC140.17154760446023773No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGCGAACCGTCAGAAAT140.17154760446023773No Hit
CGGAATGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT140.17154760446023773No Hit
CGGAAGGATCATTACCACACCAAAGACAATCCACGTGAACCGTCAGAAAT130.1592942041416493No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCGGAAAT130.1592942041416493No Hit
CGGAAGGATCATTACCACGTCGTCGTCAGCAGTGGATGTCTAGGCTCTGT130.1592942041416493No Hit
CGGAAGGATCATTACCACACCAAAAACAGTCCACGTGAACCGTCAGAAAT130.1592942041416493No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGCCAGAAAT130.1592942041416493No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTAAGAAAT130.1592942041416493No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGACTCTGTACTG130.1592942041416493No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAGT120.1470408038230609No Hit
CGGAAGGATCATTACCACACCAAAAACAACCCACGTGAACCGTCAGAAAT120.1470408038230609No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA120.1470408038230609No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTAAAAA120.1470408038230609No Hit
CGGAAGGATAATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT120.1470408038230609No Hit
CGGAAGGATCATTACCACACCAAAAACGATCCACGTGAACCGTCAGAAAT120.1470408038230609No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTCAAAAAA120.1470408038230609No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACAGTCAGAAAT110.1347874035044725No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAGAT110.1347874035044725No Hit
CGGAAGGATCATTACCACACCAAAAACAATACACGTGAACCGTCAGAAAT110.1347874035044725No Hit
CGGAAGGATCATTACAACACCAAAAACAATCCACGTGAACCGTCAGAAAT110.1347874035044725No Hit
CGGAAGGATCATTACCACACCAAGAACAATCCACGTGAACCGTCAGAAAT100.12253400318588407No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTCAGAAAT90.11028060286729569No Hit
CTGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT90.11028060286729569No Hit
CGGAAGGATCATTACCACCAAAAAACTATCCACGTGAACCGTTAAACAAG90.11028060286729569No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAGAAA90.11028060286729569No Hit
CGGAAGTATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT90.11028060286729569No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACTGTCAGAAAT90.11028060286729569No Hit
CGGAAGGATCATTACCACACCAAAAAAAGCTTTCCACGTGCACCGTTGTA90.11028060286729569No Hit
CGGAAGGATTATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT90.11028060286729569No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)