FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_ITS-OODve825.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_ITS-OODve825.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5430
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT466785.94843462246777No Hit
CGGAAGGATCATTACCAAACCAAAAACTATCCACGTGAACCGCTTTGTAT280.5156537753222836No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTTAACCGCTTTGTAT270.49723756906077343No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC260.4788213627992633No Hit
CGGAAGGATCATTACAACACCAAAAACTATCCACGTGAACCGCTTTGTAT170.31307550644567217No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGATTTGTAT170.31307550644567217No Hit
CGGAAGTATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT170.31307550644567217No Hit
CGGAATGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT150.2762430939226519No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCGCTTTGTAT140.2578268876611418No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC140.2578268876611418No Hit
CGGAAGGATCATTACCACACCAAAAACTATCAACGTGAACCGCTTTGTAT140.2578268876611418No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAGCTTTGTAT140.2578268876611418No Hit
CTGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT130.23941068139963165No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCGCTTTGTAT130.23941068139963165No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCGCTTTGTAT120.22099447513812157No Hit
CGGAAGGATTATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT110.20257826887661143No Hit
CGGAAGGATAATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT110.20257826887661143No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAC100.1841620626151013No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACTGCTTTGTAT100.1841620626151013No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCGCTTTGTAT100.1841620626151013No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCGCTTTGTAT90.16574585635359115No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGCTTTGTAT90.16574585635359115No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCCTTGTAT80.14732965009208102No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCGCTTTGTAT80.14732965009208102No Hit
CGGAAGGATCATTACCCCACCAAAAACTATCCACGTGAACCGCTTTGTAT70.1289134438305709No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCGCTTTGTAT70.1289134438305709No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCGCTTTGTAT70.1289134438305709No Hit
CGGAAGGATCATTACCACACCAAAACTATCCACGTGAACCGCTTTGTATT70.1289134438305709No Hit
CGGAAGGATCATTATCACACCAAAAACTATCCACGTGAACCGCTTTGTAT60.11049723756906078No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCGCTTTGTAT60.11049723756906078No Hit
CGGAAGGATCATTACCACACCGAAAACTATCCACGTGAACCGCTTTGTAT60.11049723756906078No Hit
AGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT60.11049723756906078No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTTTGTAT60.11049723756906078No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)