FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_ITS-OODve807.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_ITS-OODve807.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10014
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT377137.65727980826842No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA148514.829239065308569No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC107310.714999001398043No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTATCAAC6306.291192330736968No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT6196.181346115438386No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCCCGTGAACCGTATCAAC1321.318154583582984No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT500.49930097862991807No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC460.45935690033952464No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGTCAGAAAT350.3495106850409427No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCGCTTTGTATTG340.3395246654683443No Hit
CGGAAGGATCATTACCACTTGGCAGCAGTGGATGTCTAGGCTCTGTCTCT300.2995805871779509No Hit
CGGAAGGATCATTACCACCGGCAGCAGTGGATGTCTAGGCTCTGTCTCTT280.27960854803275415No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGCTTTGTAT270.2696225284601558No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCTTTGTA270.2696225284601558No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTTAACCGCTTTGTAT250.24965048931495903No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCGCTTTGTAT250.24965048931495903No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTATCAAAC230.22967845016976232No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCGCTTTGTAT230.22967845016976232No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCGCTTTGTAT220.21969243059716398No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGCTTTGTAT210.2097064110245656No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCCTTGTAT190.18973437187936887No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCGCTTTGTAT180.17974835230677053No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGCTTTGTAT180.17974835230677053No Hit
CGGAAGGATCATTACCACACCTAAAACCTTCCCCCGTGAACCGTATCAAC170.16976233273417216No Hit
CGGAAGGATCATTACCACATCTAAAAAATTTCCACGTGAACCGTATCAAA170.16976233273417216No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGCGTGAACCGCTTTGTAT170.16976233273417216No Hit
CGGAAGGATCATTACCACACCAAAAACTATCAACGTGAACCGCTTTGTAT160.15977631316157379No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTCCCCCGTGAACCGTATCAAC150.14979029358897544No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCGCTTTGTAT150.14979029358897544No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCGCTTTGTAT150.14979029358897544No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTCTGTAT150.14979029358897544No Hit
CGGAAGGATTATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT140.13980427401637707No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCGCTTTGTAT140.13980427401637707No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAAACC140.13980427401637707No Hit
CGGAAGTATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT130.1298182544437787No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCGCTTTGTAT130.1298182544437787No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTCAGAAAT120.11983223487118035No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAA120.11983223487118035No Hit
CGGAAGGATCATTACCACACCAAAAACTGTCCACGTGAACCGCTTTGTAT120.11983223487118035No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC110.10984621529858199No Hit
CGGAAGGATAATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT110.10984621529858199No Hit
CGGAAGGATCATTACCACACCGAAAACTATCCACGTGAACCGCTTTGTAT110.10984621529858199No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTTAACCGTATCAAA110.10984621529858199No Hit
CGGAAGGATCATTACCACACCAGAAACTATCCACGTGAACCGCTTTGTAT110.10984621529858199No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGATTTGTAT110.10984621529858199No Hit
CGTAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT110.10984621529858199No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)