FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_ITS-OODve804.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_ITS-OODve804.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8646
Sequences flagged as poor quality0
Sequence length301
%GC50

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT605470.0208188757807No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA4525.227851029377747No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGTCAGAAAT2773.203793661808929No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTG1001.1566042100393246No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT580.6708304418228083No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGACCCGTATCAA490.566736062919269No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA430.49733981031690955No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG390.4510756419153366No Hit
CGGAAGGATCATTACCACACCAAAAACAATTCACGTGAACCGTCAGAAAT390.4510756419153366No Hit
CGGAAGTATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT370.42794355771455006No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTTAACCGTCAGAAAT320.3701133472125839No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCGGAAAT290.33541522091140413No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGGACCGTCAGAAAT290.33541522091140413No Hit
CGGAAGGATCATTACCACGCCAAAAACAATCCACGTGAACCGTCAGAAAT280.3238491788110109No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGCCAGAAAT270.31228313671061764No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAGT270.31228313671061764No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGCGAACCGTCAGAAAT260.3007170946102244No Hit
CGGAAGGATAATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT250.28915105250983114No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT250.28915105250983114No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCATAAAT240.2775850104094379No Hit
CGGAAGGATCATTACCACACCGAAAACAATCCACGTGAACCGTCAGAAAT230.26601896830904465No Hit
CGGAATGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT230.26601896830904465No Hit
CGGAAGGATCATTACCACACCAAGAACAATCCACGTGAACCGTCAGAAAT220.2544529262086514No Hit
CGGAAGGATCATTACCACACCAAAAACGATCCACGTGAACCGTCAGAAAT220.2544529262086514No Hit
CGGAAGGATCATTACCAAACCAAAAACAATCCACGTGAACCGTCAGAAAT210.24288688410825815No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAGAT210.24288688410825815No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTAAGAAAT200.2313208420078649No Hit
CTGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT200.2313208420078649No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCGCGTGAACCGTCAGAAAT190.21975479990747168No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTAGAAAT190.21975479990747168No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT180.2081887578070784No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTTCCACGTGAACCGTATCAA170.19662271570668519No Hit
CGGAAGGATTATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT170.19662271570668519No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGGAAT170.19662271570668519No Hit
CGGAAGGATCATTACCACACCAAAAACAGTCCACGTGAACCGTCAGAAAT170.19662271570668519No Hit
CGGAAGGATCATTACCACACCAAAGACAATCCACGTGAACCGTCAGAAAT160.18505667360629194No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACATGAACCGTCAGAAAT160.18505667360629194No Hit
CGGAAGGATCATTACCACACCAAAAGCAATCCACGTGAACCGTCAGAAAT150.17349063150589866No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGACTCTGTACTG150.17349063150589866No Hit
CGGAAGGATCATTACCACACCAGAAACAATCCACGTGAACCGTCAGAAAT140.16192458940550544No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTATCAACC140.16192458940550544No Hit
CGGAAGGATCATTACCACACCAAAAACAACCCACGTGAACCGTCAGAAAT130.1503585473051122No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC130.1503585473051122No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACAGTCAGAAAT120.13879250520471895No Hit
CGGAAGGATCATTACCACGTCAGCAGTGGATGTCTAGGCTCTGTCTCTTA110.1272264631043257No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCATCAGAAAT110.1272264631043257No Hit
CGGAAGGATCATTACCACACCAAAACAATCCACGTGAACCGTCAGAAATA110.1272264631043257No Hit
CGGAAGGATCATTACCACACCAAAAACAATCAACGTGAACCGTCAGAAAT100.11566042100393245No Hit
CGGAAGGATCATTACAACACCAAAAACAATCCACGTGAACCGTCAGAAAT100.11566042100393245No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCATGTGAACCGTCAGAAAT90.1040943789035392No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTGAACA90.1040943789035392No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTAAACCGTCAGAAAT90.1040943789035392No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)