FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_ITS-OODve780.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_ITS-OODve780.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98
Sequences flagged as poor quality0
Sequence length301
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC7778.57142857142857No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT22.0408163265306123No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT22.0408163265306123No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT11.0204081632653061No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTCT11.0204081632653061No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCATTGTCT11.0204081632653061No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTTTACCGTATCATC11.0204081632653061No Hit
CGGAAGGACCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC11.0204081632653061No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC11.0204081632653061No Hit
CGGAAGTATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC11.0204081632653061No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTTAACCGTATCAAC11.0204081632653061No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTATCAAA11.0204081632653061No Hit
CGGAAGGATCATTACCACACCTAAAACCTTTCCACGTGAACCGTATCAAC11.0204081632653061No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTATCAAC11.0204081632653061No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGGGAACCGTCAGAAAC11.0204081632653061No Hit
CGGAAGGATCAATACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC11.0204081632653061No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTAAAT11.0204081632653061No Hit
CGGAAGGATGATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC11.0204081632653061No Hit
CGGAAGGATCTTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA11.0204081632653061No Hit
AGACCAGGAATGTATATAGGCGACACCGACGACGGCTCGGGCCTGCACCA11.0204081632653061No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)