FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_ITS-OODve770.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_ITS-OODve770.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8826
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA203223.022886924994335No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT151517.16519374575119No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA110212.485837298889644No Hit
CGGAAGGATCATTACCACACCAAAAAACTTACCACGTGAATCTGTACTGT4164.713346929526399No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC3403.8522547020167686No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGACCCGTTGTAA2973.3650577838205304No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC1691.9147971901200995No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGACCCGTCAAAA1591.8014955812372537No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTATCCACGTGAACCGTCAAA1311.4842510763652843No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGTCAGAAAT941.0650351234987536No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTACAAT780.8837525492861998No Hit
CGGAAGGATCATTACCACACCAAAAAACCTTTCCACGTGAACCGTTGTAA580.6571493315205076No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTGTAA570.645819170632223No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTAAAAA510.5778382053025153No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTATAAT500.5665080444142306No Hit
CGGAAGGATCATTACCACACCAAAAAAACTCTCCACGTGAACCGTCAAAA470.5325175617493768No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGACCCGTTAAGC460.5211874008610922No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAAAA450.5098572399728076No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTGTAAC390.4418762746430999No Hit
CGGAAGGATCATTACCACACCAAAAAACCTATCCACGTGAACCGTCAAAA370.4192159528665307No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAGCCGTTGTAA350.39655563108996145No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTGTAACT280.3172445048719692No Hit
CGGAAGGATCATTACCACACCAAAAAAACTCTCCACGTGACCCGTCAAAA270.30591434398368456No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA270.30591434398368456No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT250.2832540222071153No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAGAA200.22660321776569228No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTTGCAA200.22660321776569228No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTATCCACGTGCACCGTCAAA200.22660321776569228No Hit
CGGAAGGATCATTACCACACCAAAAAACTTCCCACGTGAATCTGTACTGT200.22660321776569228No Hit
CGGAAGGATCATTACCACCAAAAAAACTTTCCACGTGAACCGTTGTAACT180.20394289598912305No Hit
CGGAAGGATCATTACCACCAAAAAAACTATCCACGTGAACCGTCAAAAAA180.20394289598912305No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTAAGC170.19261273510083843No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCATGTGAACCGTTGTAA130.14729209154769998No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTTAACCGTCAGAAAT130.14729209154769998No Hit
CGGAAGGATCATTACCACACCAAAAAACCTATCCACGTGACCCGTCAAAA130.14729209154769998No Hit
CGGAAGGATCATTACCACACCAAAAAACCTTTCCACGTGACCCGTTGTAA130.14729209154769998No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTGTAA120.13596193065941536No Hit
CGGAAGGATCATTACCACACCTAAAAAACTCTCCACGTGAACCGTTAAGC120.13596193065941536No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA120.13596193065941536No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTACAA110.12463176977113076No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTTGTAA110.12463176977113076No Hit
CGGAATGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA110.12463176977113076No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAGCCGTCAAAA110.12463176977113076No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAGAT110.12463176977113076No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAAAAAA110.12463176977113076No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTTAACCGTTGTAA110.12463176977113076No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGGACCGTTGTAA110.12463176977113076No Hit
CGGAAGGATCATTACCACACCTAAAAACCTATCCACGTGAACCGTTAAGC110.12463176977113076No Hit
CGGAAGGATCATTACCACACCAAGAACAATCCACGTGAACCGTCAGAAAT110.12463176977113076No Hit
CGGAAGGATCATTACCACACCAAAAAAACTGTCCACGTGAACCGTCAAAA110.12463176977113076No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGCGAACCGTCAGAAAT110.12463176977113076No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGCTGTAA100.11330160888284614No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTATAA90.10197144799456152No Hit
CGGAAGGATCATTACCACACCAAAGACAATCCACGTGAACCGTCAGAAAT90.10197144799456152No Hit
CGGAAGGATCATTACCACGCCAAAAACAATCCACGTGAACCGTCAGAAAT90.10197144799456152No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG90.10197144799456152No Hit
CGGAAGGATCATTACCACACCTAAAAAACTCTCCACGTGACCCGTTAAGC90.10197144799456152No Hit
CGGAAGTATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA90.10197144799456152No Hit
CGGAAGGATTATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA90.10197144799456152No Hit
CGGAAGGATCATTACCACACCAAAAAGACTTTCCACGTGAACCGTTGTAA90.10197144799456152No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGACCCGTTGTAA90.10197144799456152No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)