FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_ITS-OOChi740.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_ITS-OOChi740.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences811
Sequences flagged as poor quality0
Sequence length301
%GC41

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA49961.52897657213317No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGACCCGTATTCA779.494451294697903No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC394.808877928483354No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA161.972872996300863No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTTCCACGTGAACCGTATTCA111.3563501849568433No Hit
CGGAAGGATCATTACCACGTCGTCAGCAGTGGATGTCTAGGCTCTGTCTC101.2330456226880395No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTCAA60.7398273736128237No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT50.6165228113440198No Hit
CGGAAGGATCATTACCACACCTAAAGAACTTTCCACGTGAACCGTATTCA40.4932182490752158No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC40.4932182490752158No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTTAACCGTATTCA40.4932182490752158No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGACCCGTATCAA40.4932182490752158No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACAGTATTCA30.36991368680641185No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA30.36991368680641185No Hit
CGGAAGGATCATTACCACCTAAAAAACTTTCCACGTGAACCGTATTCAAC30.36991368680641185No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT30.36991368680641185No Hit
CGGAAGGATCATTACCACACCTAAAAAACTCTCCACGTGAACCGTATTCA30.36991368680641185No Hit
CGGAAGGATCATTACCACACCTAAAAAACCTCCCACGTGAACCGTATTCA20.2466091245376079No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAGCCGTATTCA20.2466091245376079No Hit
CGGAAGGATCATTACTACACCTAAAAAACTTTCCACGTGAACCGTATTCA20.2466091245376079No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACCGTATCAAC20.2466091245376079No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCTACGTGAACCGTATTCA20.2466091245376079No Hit
CGGAAGGAGCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA20.2466091245376079No Hit
CGGAAGGATCATTACCACACCTAGAAAACTTTCCACGTGAACCGTATTCA20.2466091245376079No Hit
CGGAAGGACCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA20.2466091245376079No Hit
CGAAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA20.2466091245376079No Hit
CGGAATGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA20.2466091245376079No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCGCGTGAACCGTATTCA20.2466091245376079No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTTCCACGTGACCCGTATTCA20.2466091245376079No Hit
CGGAAGGATCATACCACACCTAAAAAACTTTCCACGTGAACCGTATTCAA20.2466091245376079No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGATCCGTATTCA20.2466091245376079No Hit
ACGCCCAAGCAGATTTACAACGACCCGGCCAATCTGTTCGTGGCCAGCTT20.2466091245376079No Hit
CGGAAGGATAATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA20.2466091245376079No Hit
CGGAAGGATCATTACCACAGACAGCAGTTGATGTCTAGGCTCTGTCTCTT10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAGACTTTCCACGTGAACCGTATCAA10.12330456226880394No Hit
CCGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGGGAACCGTATTCA10.12330456226880394No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTTAACCGTATCAAC10.12330456226880394No Hit
ACGCCCCAGCAGACTTACAACGACCCGGCCAATCTGTTCGTGGCCAGCTT10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTTCCACGTGAACCGTATCAA10.12330456226880394No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTTTCCACGTGAACCGTATTCA10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGGAAACCGTATTCA10.12330456226880394No Hit
CGAAGGATCATTACCACACCTAAAAAACTTTCCACGTTAACCGTATTCAA10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAC10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGGACCGTATTCA10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCG10.12330456226880394No Hit
GGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCAA10.12330456226880394No Hit
CGGAAGTATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.12330456226880394No Hit
CGGATGGATCATTACCACACCTAAAAACCTTTCCACGTGAACCGTATTCA10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTTCCCGTTGAACGTTATCAA10.12330456226880394No Hit
CGGAAGGATTATTACCACACCTAAAAAACTTTCCACGTGACCCGTATTCA10.12330456226880394No Hit
CGGAGGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.12330456226880394No Hit
CGGAAGGATCATTACCCCACCTAAAAAACTTTCCACGTGAACCGTATTCA10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAAGCTTTCCACGTGACCCGTATTCA10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAATCTTTCCACGTGAACCGTATTCA10.12330456226880394No Hit
CGGAAGGATCATTATCACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTTAACCGTATTCAA10.12330456226880394No Hit
ACACCCAAGCAGATCGACAACGACCCGGCCAATCTGTTCGTGGCCAGCTT10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCCCTTGAACCGTATTCA10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCATATTCA10.12330456226880394No Hit
CGGAAGGATCATTACCACGTCGTCAGCAGTGGATGTCTAGGCTTTGTCTC10.12330456226880394No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT10.12330456226880394No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCTCTGTCTC10.12330456226880394No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGAAGTCTAGGCTCTGTCTCT10.12330456226880394No Hit
CGGAAGGATCATTATCACACCTAAAAAACTTTCCACGTGACCCGTATTCA10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTACACGTGAACCGTATTCAA10.12330456226880394No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTATTATAC10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAAACCTTCCACGTGAACCGTATTCA10.12330456226880394No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTTCTT10.12330456226880394No Hit
ACACCCAAGCAGATCTACAACGACCCGGCCCATCTGTTCGTGGCCAGCTT10.12330456226880394No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAGACTTTCCACGTGAACCGTATTCA10.12330456226880394No Hit
ACGCCCAAGCAGATCTACAACGACCCGGCCAATCTGTTCGTGGCCAGCTT10.12330456226880394No Hit
GCGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTC10.12330456226880394No Hit
CGGAAGGATCATTACCAAACCTAAAAAACTTTCCACGTGAACCGTATTCA10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTATCAAA10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTACTCA10.12330456226880394No Hit
TGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTTAACCGTATTCA10.12330456226880394No Hit
CGCAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTTCCACGTGAACCTTATTCA10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGACCCGTATTTA10.12330456226880394No Hit
CGGAACGATCATTACCACACCTAAAAACCTTTCCACGTGAACCGTATTCA10.12330456226880394No Hit
CGGAAGGATGATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.12330456226880394No Hit
CGAAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAGCCGTATTCA10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAATCGTATTCA10.12330456226880394No Hit
AGGCCGGGAATGTACATTGGCGACACCGACGACGGGTCGGGCCTGCATCA10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTTCCCCTGCACCCTTTTTCA10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAAACGTATTCA10.12330456226880394No Hit
CAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAACC10.12330456226880394No Hit
CGGAAGGATCATTACCACTCGTCGGCAACAGTGGATGTCTAGGCTCTGTC10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTTAAAAACTTTCCACGTGAACCGTATTCA10.12330456226880394No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTTTC10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAGAACTTTCCACGTGACCCGTATTCA10.12330456226880394No Hit
CGGAAGGATCATTACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATACAC10.12330456226880394No Hit
CCGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGCACCGTATTC10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC10.12330456226880394No Hit
CGGAAGGTCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCAA10.12330456226880394No Hit
CGGAAGGATCATTACCACACCCAAAAAACTTTCCACGCGAACCGTATTCA10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAATCTTTACACGAGAACCGTAGTCA10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAAGCTTTCCACGTGAACCGTATTCA10.12330456226880394No Hit
CGGATGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.12330456226880394No Hit
CGGAAGGATTATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGGCCCGTATTCA10.12330456226880394No Hit
CGGAAGTATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAC10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCCACGTGAACCGTATTCA10.12330456226880394No Hit
ACACCCAAGCAGATTTACAACGACCCGGCCAATCTGTTCGTGGCCAGCTT10.12330456226880394No Hit
CGGAAGGAACATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC10.12330456226880394No Hit
CGGAAGGAGCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACAGTATCAAC10.12330456226880394No Hit
CGGAAGCATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.12330456226880394No Hit
CAGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.12330456226880394No Hit
CGGAAGGATCATTACCACGTCGTCAGCAGTGGATGTCTAGCTCTGTCTCT10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGCGAACCGTATTTA10.12330456226880394No Hit
CGGAAGGATCATTAACACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.12330456226880394No Hit
CGGAAGGATCATCACAACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.12330456226880394No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTAA10.12330456226880394No Hit

[FAIL]Adapter Content

Adapter graph