FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_ITS-OOATH653.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_ITS-OOATH653.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1382
Sequences flagged as poor quality0
Sequence length301
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC77355.933429811866866No Hit
CGGAAGGATCATTACCACACCTAAAATCTTTCCACGTGAACCGTTTAAAC805.788712011577424No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC795.716353111432706No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT604.341534008683068No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT533.8350217076700437No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA201.447178002894356No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC151.085383502170767No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA90.6512301013024602No Hit
CGGAATGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC60.43415340086830684No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAC60.43415340086830684No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC50.361794500723589No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC50.361794500723589No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGACCCGTTAAGC50.361794500723589No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTAAAC50.361794500723589No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTTAAGCA40.2894356005788712No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTATCAA40.2894356005788712No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGTCAGAAAT40.2894356005788712No Hit
CGGAAGGATCATTACCACATCTGACGCTGCCACGACAGCAGTGGATGTCT40.2894356005788712No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATGAAC40.2894356005788712No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC40.2894356005788712No Hit
CGGAAGGATCATTACCACACCAAATACCCATCCACGTGAACGATTGAACT30.21707670043415342No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCACTTTGTA30.21707670043415342No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC30.21707670043415342No Hit
CGGAAGGATCTTACCACACCTAAAATCTTTCCACGTGAACCGTTTAAACT30.21707670043415342No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC30.21707670043415342No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAC30.21707670043415342No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATGAAC30.21707670043415342No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAATCGTATCAAC30.21707670043415342No Hit
CTGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC30.21707670043415342No Hit
CGGAAGGATCATTACCACACCTAAAAACCTATCCACGTGAACCGTTAAGC30.21707670043415342No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC30.21707670043415342No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCATATCAAC30.21707670043415342No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACAGTATCAAC30.21707670043415342No Hit
CGGAGGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC20.1447178002894356No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACATGAACCGTATCAACA20.1447178002894356No Hit
CGGAAGGATCATTACCACATCTAAAAACTTTCCACGTGAACCGTATCAAC20.1447178002894356No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC20.1447178002894356No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTAAGCAA20.1447178002894356No Hit
CGGAATGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC20.1447178002894356No Hit
CGGAAGGATCATTACCACGAGGCCAGCAGTGGATGTCTAGGCTCTGTCTC20.1447178002894356No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAC20.1447178002894356No Hit
CGGAAGGATAATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC20.1447178002894356No Hit
CGGAAGGATCATTACCAAACCTAAAAACTTTCCACGTGAACCGTATCAAC20.1447178002894356No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC20.1447178002894356No Hit
CGGAAGGATCATTACCCCACCTAAAAACTTTCCACGTGAACCGTATCAAC20.1447178002894356No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCACTTTGTAT20.1447178002894356No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTTAACCGTATCAAC20.1447178002894356No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG20.1447178002894356No Hit
CGGAAGGATCATTACCACACCAAAAAAACTCTCCACGTGAACCGTCAAAA20.1447178002894356No Hit
CGGAAGGATCATTACCACACCTAAAAAACTCTCCACGTGAACCGTTAAGC20.1447178002894356No Hit
CGGAAGTATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC20.1447178002894356No Hit
CGGAAGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA20.1447178002894356No Hit
CGGAAGGATCATTACAACACCTAAAAACTTTCCACGTGAACCGTATCAAC20.1447178002894356No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACCGTATCAAC20.1447178002894356No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTATCAAC20.1447178002894356No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA20.1447178002894356No Hit
CGAAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC20.1447178002894356No Hit
CGGAAGGATCATTACCACACTTAAAAACTTTCCACGTGAACCGTATCAAC20.1447178002894356No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC20.1447178002894356No Hit
CGGAAGGATTATTACCACACCTAAAATCTTTCCACGTGAACCGTTTAAAC20.1447178002894356No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATAAAC20.1447178002894356No Hit
CGTAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC20.1447178002894356No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAATA20.1447178002894356No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)