FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_ITS-OOATH622.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_ITS-OOATH622.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences191
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC7237.696335078534034No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT6232.460732984293195No Hit
CGGAAGGATCATTACCACACTCAGCAGTGGATGTCTAGGCTCTGTCTCTT31.5706806282722512No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCTTTGTA31.5706806282722512No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT31.5706806282722512No Hit
CGGAAGGATCATTACCAAACCTAAAAACTTTCCACGTGAACCGTATCAAC21.0471204188481675No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGCTTTGTA21.0471204188481675No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC21.0471204188481675No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGCTTTGTAT10.5235602094240838No Hit
CGGCCGGCTATGTATATTGGCGACACCGGCGCGCGGGGCTTTCATCATCT10.5235602094240838No Hit
CGGAATGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.5235602094240838No Hit
AGTCCCGGGATGTATATAGGCGATACCGACGACGGCTCCGGCCTCCACCA10.5235602094240838No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTTAACCGTATCAAC10.5235602094240838No Hit
GCGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTA10.5235602094240838No Hit
CTGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT10.5235602094240838No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCGCTTTGTAT10.5235602094240838No Hit
CGTAAGGTCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA10.5235602094240838No Hit
CGGAAGGATCATTACCACACCTTAAAACTATCCACGTGAACCGTTTGTAC10.5235602094240838No Hit
CGGAATGATCATTACCACACCAAAAACTATCCACGTTAACCGCTTTGTAT10.5235602094240838No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC10.5235602094240838No Hit
CGACCGGCGATGTATATCGGCTCGACGGGCCCACGCGGGCTGCACCACCT10.5235602094240838No Hit
CGTAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT10.5235602094240838No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACCGTATCAAC10.5235602094240838No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGATTTGTAT10.5235602094240838No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGCACCGCTTTGTAT10.5235602094240838No Hit
CGGAAGTATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.5235602094240838No Hit
CGGCCCGGCATGTATATCGGCGACACCGACGACGGCTCCGGCCTCCACCA10.5235602094240838No Hit
CGGAAGGATCATCACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT10.5235602094240838No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC10.5235602094240838No Hit
AGACCAGGAATGTATATCGGCGATACGGATGATGGCTCGGGTCTGCACCA10.5235602094240838No Hit
AGACCAGCGATGTACATTGGCTCGACCGGTGAGCGCGGGCTTCACCACCT10.5235602094240838No Hit
AGCCCCGCAATGTATATCGGCAGCACGGACCCCCGCGGTCTCATGCACTG10.5235602094240838No Hit
CGGAAGGATCATTACCACACCTAAAACACTATACATGTGCACCGTTATAT10.5235602094240838No Hit
CGGAAGGATCATTACCACACCTAAAAACTGTCCACGTGAACCGTATCAAC10.5235602094240838No Hit
CGGAAGGATCATTACCACACCTAAAACCTTTCAACGTGAACAGTATCAAC10.5235602094240838No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG10.5235602094240838No Hit
CGGAAGGATCATACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA10.5235602094240838No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTTCTCTT10.5235602094240838No Hit
CGGAAGTATCATTACCACACCTAAAACTATCCACGTGAACCGCTTTGTAT10.5235602094240838No Hit
CGGAAGGATAATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT10.5235602094240838No Hit
AGCCCTGGAATGTACATCGGCGATACCGACGACGGGTCGGGCCTCCACCA10.5235602094240838No Hit
CGTAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.5235602094240838No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAC10.5235602094240838No Hit
AGGAAGGATAATTACCACACCTAAAAACTTTCCACGTGAACCGTATAAAA10.5235602094240838No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAT10.5235602094240838No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA10.5235602094240838No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC10.5235602094240838No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAC10.5235602094240838No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC10.5235602094240838No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCCCGTTGACCCCTTTCTAT10.5235602094240838No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)