FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_ITS-OOATH608.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_ITS-OOATH608.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3289
Sequences flagged as poor quality0
Sequence length301
%GC51

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT259478.8689571298267No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCGTCAGAAAT1364.134995439343266No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAGT170.5168744299179082No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG150.4560656734569778No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAGAT140.4256612952265126No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTTAACCGTCAGAAAT130.3952569169960474No Hit
CGGAAGGATCATTACCACACCAAAAACGATCCACGTGAACCGTCAGAAAT130.3952569169960474No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGCCAGAAAT110.33444816053511706No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT110.33444816053511706No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCATAAAT110.33444816053511706No Hit
CGGAAGTATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT100.30404378230465184No Hit
CGGAAGGATTATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT100.30404378230465184No Hit
CGGAAGGATCATTACCACACCAAAAACAACCCACGTGAACCGTCAGAAAT100.30404378230465184No Hit
CGGAAGGATAATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT90.2736394040741867No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGGACCGTCAGAAAT90.2736394040741867No Hit
CGGAAGGATCATTACCAAACCAAAAACAATCCACGTGAACCGTCAGAAAT90.2736394040741867No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCGGAAAT80.2432350258437215No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCGCGTGAACCGTCAGAAAT80.2432350258437215No Hit
CGGAAGGATCATTACCACACCAAAAGCAATCCACGTGAACCGTCAGAAAT80.2432350258437215No Hit
CGGAAGGATCATTACCACACCAGAAACAATCCACGTGAACCGTCAGAAAT80.2432350258437215No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAC80.2432350258437215No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACAGTCAGAAAT80.2432350258437215No Hit
CGGAATGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT80.2432350258437215No Hit
CGGAAGGATCATTACCACACCAAAGACAATCCACGTGAACCGTCAGAAAT70.2128306476132563No Hit
CTGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT70.2128306476132563No Hit
CGGAAGGATCATTACCACACCAAGAACAATCCACGTGAACCGTCAGAAAT70.2128306476132563No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTAAGAAAT60.18242626938279113No Hit
CGGAAGGATCATTACAACACCAAAAACAATCCACGTGAACCGTCAGAAAT60.18242626938279113No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGGAAT60.18242626938279113No Hit
CGGAAGGATCATTACCACACCAAAAACAGTCCACGTGAACCGTCAGAAAT60.18242626938279113No Hit
CGGAAGGATCATTACCACACCGAAAACAATCCACGTGAACCGTCAGAAAT50.15202189115232592No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTAAACCGTCAGAAAT50.15202189115232592No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA50.15202189115232592No Hit
CGTAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT50.15202189115232592No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACTGTCAGAAAT50.15202189115232592No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT50.15202189115232592No Hit
CGGAAGGATCATTACCACGCCAAAAACAATCCACGTGAACCGTCAGAAAT50.15202189115232592No Hit
CGGAAGGATCATTACCACACCAAAAACAATCAACGTGAACCGTCAGAAAT50.15202189115232592No Hit
CGGAAGGATCATTACCACACCAAAAATAATCCACGTGAACCGTCAGAAAT50.15202189115232592No Hit
CGGAAGGATCATTCCACACCAAAAACAATCCACGTGAACCGTCAGAAATA40.12161751292186075No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCATGTGAACCGTCAGAAAT40.12161751292186075No Hit
CGGAAGGATCATTACCGCACCAAAAACAATCCACGTGAACCGTCAGAAAT40.12161751292186075No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACATGAACCGTCAGAAAT40.12161751292186075No Hit
CGGAAGGATCTTACCACACCAAAAACAATCCACGTGAACCGTCAGAAATA40.12161751292186075No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTAGAAAT40.12161751292186075No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)