FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_ITS-OOATH588.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_ITS-OOATH588.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences171
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA5532.16374269005848No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC148.187134502923977No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT95.263157894736842No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA84.678362573099415No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTG63.508771929824561No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGACCCGTTGTAA52.923976608187134No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTGTAAA42.3391812865497075No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGAAA42.3391812865497075No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC31.7543859649122806No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTGTAA21.1695906432748537No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGACTCTGTACTG21.1695906432748537No Hit
CGGAAGGATCATTACCACCGGCAGCAGTGGATGTCTAGGCTCTGTCTCTT21.1695906432748537No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTGTAAC21.1695906432748537No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAATCTGTACTG21.1695906432748537No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG21.1695906432748537No Hit
CGGAAGGATCATTACAACACCAAAAAAACTATCCACGTGAACCGTCAAAA21.1695906432748537No Hit
CGGAAGGATCATTACCACACCAAAAAACCTTTCCACGTGACCCGTTGTAA10.5847953216374269No Hit
AGCCCTGCCATGTACATCGGCGACACATCCGACGGTACTGGCCTGCATCA10.5847953216374269No Hit
CGCCCGGGGATGTATATCGGCTACACCTCGGATGGCCCCGGCCTGCATCA10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTCAAAA10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAACCAA10.5847953216374269No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCATGTGAACCGTTGTAA10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAAAACTCTCCACGTGAACCGTCAAAA10.5847953216374269No Hit
CGGAAGGATCATTATCACACCATAAAACTTTCCACGTGAACCGTTGTAAC10.5847953216374269No Hit
CGTCCTGGTATGTACATCGGCGATACGCACGACGGCACCGGGCTGCACCA10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAACCGTTGAA10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCGCGTGAGCCGTTGTAA10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT10.5847953216374269No Hit
CGGAAGTATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAAAATTTTCCACGTGAACCGTTGTAA10.5847953216374269No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACTGTCGTTAT10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTTAAA10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCGCTTTGTAT10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAGAAAACTTACCACGTGACTCTGTACTG10.5847953216374269No Hit
CGGAAGGATCATTACCACACCGAAGAAACTTTCCACGTGACCCGTTGTAA10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAAACCTTTCCACGTGAACCGTTGTAG10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTACAA10.5847953216374269No Hit
AGGCCGGGGATGTATATTGGCTCGACTGGAGAGCGTGGTCTGCACCACCT10.5847953216374269No Hit
AGGCCGGGGATGTACATAGGCTCGACCGGAGAGCGTGGTCTGCACCACCT10.5847953216374269No Hit
CGGAAAGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCTGGTA10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGGGAACCGTTGAAA10.5847953216374269No Hit
CGTCCAGGTATGTATATCGGCGACACCTCCGACGGCACGGGCCTGCACCA10.5847953216374269No Hit
CGGAAGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAATA10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAG10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGGGAACCGTTGTAA10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACTTGAACCTATGTAA10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAAACCTTTCCACGTGAACCGTTGTAA10.5847953216374269No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTGTAAC10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGACCCGTTATAA10.5847953216374269No Hit
AGCCCCGGCATGTACATCGGATCCACGGGGCCGCGCGGTCTGCACCACCT10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAAACCTTTCCACGTGAACCGTCAAAA10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAAACCTATCCACGTGAACCGTTGTAA10.5847953216374269No Hit
CGTCCGGGTATGTATATAGGCTCCACCGGTGAGCGCGGTCTGCACCACCT10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAAAACTCTCCACGTGACCCGTCAAAA10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGACCCGTCAAAA10.5847953216374269No Hit
AGGCCTGGGATGTACATAGGCGATACCGACGACGGGTCGGGCCTGCACCA10.5847953216374269No Hit
CGTCCAGCCATGTATATCGGCGACACCTCCGACGGCACGGGCCTGCACCA10.5847953216374269No Hit
AGTCCGGCCATGTATATTGGCGACACCGACGATGGCTCGGGCCTGCACCA10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGGGAACCGTCAAAA10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGCGAACCGTCAGAAAT10.5847953216374269No Hit
CGGAAGGATCATTACCACGCCAAAAAACTTTCCACGTGAACCGTTACAAT10.5847953216374269No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGACTCTGTGCTG10.5847953216374269No Hit
CGGCCGGATCCTTCCCCCCCCCCCCCCTTTCCACGTGAACCGCTTTGTAT10.5847953216374269No Hit
CGGAATGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA10.5847953216374269No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)