FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_GyrBDve864.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_GyrBDve864.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61
Sequences flagged as poor quality0
Sequence length301
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCCAAGCAGATCTACATCACGGTAGTTGAGATCGGACTTCATAAGGT58.19672131147541No Hit
ACGCCCAAGCAGATTTACATCACGGTAGTTGAGATCGGACTTCATAAGGT58.19672131147541No Hit
ACACCCAAGCAGATCTACATCACGGTAGTTGAGATCGGACTTCATAAGGT46.557377049180328No Hit
ACACCCAAGCAGATTTACATCACGGTAGTTGAGATCGGACTTCATAAGGT34.918032786885246No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG23.278688524590164No Hit
AGTCCGGCAATGTATATCGGCGACACCTCCGACGGCACGGGCCTGCACCA11.639344262295082No Hit
AGTCCAGGAATGTATATCGGCGACACGTCCGACGGCACCGGCCTGCACCA11.639344262295082No Hit
CGGCCGGGGATGTACATCGGCTCGACCGGCGAGCGCGGCCTGCACCACAT11.639344262295082No Hit
AGTCCAGGAATGTACATCGGCTCGACCGGCGAGCGCGGCCTGCACCACAT11.639344262295082No Hit
ACGCCCCAGCAGATTTACATCACGGTAGTTGAGATCGGACTTCATAAGGT11.639344262295082No Hit
AGCCCGGCTATGTATATAGGGTCCACCGGCGACGGCTCGGGCCTGCATCA11.639344262295082No Hit
AGGCCGGGGATGTATATCGGTTCGACGTCATCCTGCGGTCTGCACCATCT11.639344262295082No Hit
CGACCGGCGATGTATATAGGCGATACCGACGACGGATCGGGCCTCCACCA11.639344262295082No Hit
AGTCCAGGGATGTACATCGGCGACACCGACGACGGGTCGGGCTTGCACCA11.639344262295082No Hit
AGCCCAGGCATGTACATTGGCTCGACCGGAGAGCGTGGTCTGCACCACCT11.639344262295082No Hit
CGGCCGGGCATGTATATTGGGTCCACCGACAGCCGTGGCGTCAACCACCT11.639344262295082No Hit
AGACCCGCGATGTATATCGGCGACACCGACTACGGGTCGGGCCTGCATCA11.639344262295082No Hit
CGACCCGGTATGTATATAGGCTCCACCGGCGAGCGCGGCCTGCACCACCT11.639344262295082No Hit
AGCCCAGGGATGTACATCGGCGATACCGGCAGCTACGGGCTTCACCACTT11.639344262295082No Hit
ACGCCCAAGCAGATTTACATCACGGTAGTCGAGATCGGACTTCATAAGGT11.639344262295082No Hit
CGCCCGGCTATGTATATTGGCGACACGGGTATCAAGGGCCTCCACCACCT11.639344262295082No Hit
ACACCCAAGCAGATCTACAACGACCCAGCCAATCTGTTTGTGGCCAGCTT11.639344262295082No Hit
AGGCCAGGAATGTATATCGGCGACACCGACGACGGCTCGGGCCTCCACCA11.639344262295082No Hit
CGCCCGGCTATGTACATCGGTGGCACCGGCAAGGACGGTTACCACCACCT11.639344262295082No Hit
AGGCCAGGGATGTACATAGGCGACACCTCCGACGGCACCGGCCTGCACCA11.639344262295082No Hit
CGTCCAGCAATGTATATCGGCGACACCTCCGACGGCACCGGCCTGCACCA11.639344262295082No Hit
CGGCCGGGGATGTACATCGGCGACACCGACGACGGCTCCGGCTTTCACCA11.639344262295082No Hit
AGTCCGGCCATGTACATTGGCGGCACCGGTGCGGCCGGGCTGCACCACCT11.639344262295082No Hit
AGTCCTGGGATGTATATAGGCGACACCGACGACGGGTCGGGCCTGCACCA11.639344262295082No Hit
CGGCCGGGGATGTACATCGGCGACACGTCCGACGGCACCGGCCTGCACCA11.639344262295082No Hit
ACGCCCAAGCAGATTTACAACGACCCGGCCAATCTGTTTGTGGCCAGCTT11.639344262295082No Hit
CGCCCTGGTATGTACATCGGCGACACGTCCGACGGCACTGGCCTGCACCA11.639344262295082No Hit
ACGCCCCAGCAGATCTACATCACGGTAGTTGAGATCGGACTTCATAAGGT11.639344262295082No Hit
CGTCCGGGAATGTATATTTGCGATACCGACGACGGGTCGGGCCTGCACCA11.639344262295082No Hit
CGCCCTGGCATGTACATTGGATCGACCGGACCCCGCGGACTGCATCACCT11.639344262295082No Hit
AGACCTGCAATGTACATCGGCTCGACCGATTCCCGGGGCCTCATGCACTG11.639344262295082No Hit
ACGCCCAAGCGATTTACATCACGGTAGTTGAGATCGGACTTCATAAGGTG11.639344262295082No Hit
CGGCCAGGGATGTATATCGGCGATACCGACGACGGATCGGGCCTCCACCA11.639344262295082No Hit
AGGCCGGCTATGTACATCGGCGACACGGATGACGGGTCCGGCCTGCATCA11.639344262295082No Hit
AGTCCCGGTATGTATATCGGCTCCACCGGTGAGCGCGGTCTGCACCACCT11.639344262295082No Hit
AGGCCCGGAATGTATATCGGCAACACCGACGACGGCTCGGGCCTGCACCA11.639344262295082No Hit
CGGCCCGCAATGTACATAGGGTCGACCGGTGTGCGCGGCCTGCACCACCT11.639344262295082No Hit
AGACCCGGAATGTATATTGGCGACACCGACGACGGGTCGGGCCTGCACCA11.639344262295082No Hit
CGGCCGGGGATGTACATTGGCACCACCGACTCGCGCGGGCTCATGCACTG11.639344262295082No Hit
AGACCTGGAATGTACATTGGCTACACCTCCGACGGCACCGGCCTGCACCA11.639344262295082No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC11.639344262295082No Hit
AGGCCTGGTATGTATATCGGTTCGACCGGCCCCCGCGGACTCCATCACCT11.639344262295082No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)