FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_GyrBDve860.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_GyrBDve860.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5241
Sequences flagged as poor quality0
Sequence length301
%GC63

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCGGGAATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA100.19080328181644723No Hit
AGGCCCGGGATGTACATTGGCGACACCTCGGATGGCACCGGCCTGCACCA90.17172295363480253No Hit
CGGCCGGGGATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA80.1526426254531578No Hit
AGTCCGGGGATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA80.1526426254531578No Hit
AGGCCGGGTATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA80.1526426254531578No Hit
AGGCCAGGCATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA80.1526426254531578No Hit
CGTCCAGGTATGTACATCGGCGACACCTCGGATGGCACCGGCCTGCACCA70.1335622972715131No Hit
AGGCCGGGGATGTATATTGGCGACACCTCGGATGGCACCGGCCTGCACCA70.1335622972715131No Hit
AGGCCAGGGATGTACATCGGCGACACCTCGGATGGCACCGGCCTGCACCA70.1335622972715131No Hit
AGTCCAGGTATGTACATTGGCGACACCTCGGATGGCACCGGCCTGCACCA60.11448196908986834No Hit
AGGCCGGGAATGTACATTGGCGACACCTCGGATGGCACCGGCCTGCACCA60.11448196908986834No Hit
CGGCCTGGGATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA60.11448196908986834No Hit
AGGCCAGGGATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA60.11448196908986834No Hit
AGTCCTGGGATGTACATCGGCGACACCTCGGATGGCACCGGCCTGCACCA60.11448196908986834No Hit
AGGCCGGGCATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA60.11448196908986834No Hit
AGCCCGGGTATGTACATCGGCGACACCTCGGATGGCACCGGCCTGCACCA60.11448196908986834No Hit
AGTCCTGGAATGTACATTGGCGACACCTCGGATGGCACCGGCCTGCACCA60.11448196908986834No Hit
CGTCCCGGGATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA60.11448196908986834No Hit
AGGCCGGGGATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA60.11448196908986834No Hit
AGTCCAGGTATGTATATTGGCGACACCTCGGATGGCACCGGCCTGCACCA60.11448196908986834No Hit
AGGCCGGGTATGTACATCGGCGACACCTCGGATGGCACCGGCCTGCACCA60.11448196908986834No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)