FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_GyrBDve856.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_GyrBDve856.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1883
Sequences flagged as poor quality0
Sequence length301
%GC64

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCCAAGCAGATCTACATCACGGTAGTTGAGATCGGACTTCATAAGGT70.37174721189591076No Hit
ACACCCAAGCAGATTTACATCACGGTAGTTGAGATCGGACTTCATAAGGT50.2655337227827934No Hit
ACGCCCAAGCAGATTTACATCACGGTAGTTGAGATCGGACTTCATAAGGT40.21242697822623471No Hit
AGGCCGGGGATGTACATTGGCTCGACCGGCGAGCGCGGCCTGCACCACAT30.15932023366967604No Hit
AGCCCCGGTATGTACATCGGCGACACCGACGACGGCTCCGGCCTCCACCA30.15932023366967604No Hit
AGGCCGGGGATGTATATCGGCTCGACCGGCGAGCGCGGCCTGCACCACAT30.15932023366967604No Hit
AGGCCTGCGATGTACATCGGCTCCACCGGTGAGCGCGGCCTGCACCACCT20.10621348911311736No Hit
AGTCCTGCAATGTATATCGGTTCGACCGGTCCGCGCGGCCTGATGCACTG20.10621348911311736No Hit
CGCCCAGGGATGTATATCGGCGACACCTCCGACGGCACCGGTCTGCACCA20.10621348911311736No Hit
AGCCCCGCTATGTATATCGGCGACACCTCCGACGGCACGGGCCTGCACCA20.10621348911311736No Hit
CGACCGGCCATGTATATCGGCGACACCGACGACGGCTCCGGCCTGCACCA20.10621348911311736No Hit
AGACCGGCAATGTATATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.10621348911311736No Hit
AGGCCTGCGATGTATATCGGCGATACCGACGACGGATCGGGCCTCCACCA20.10621348911311736No Hit
AGACCGGGTATGTATATCGGCGACACCGACGACGGCTCGGGCCTGCACCA20.10621348911311736No Hit
AGCCCAGGAATGTACATCGGCGACGCGGGTATCAAGGGCCTGCACCACCT20.10621348911311736No Hit
AGGCCGGGTATGTATATCGGCAACACCGACGACGGCTCGGGCCTGCACCA20.10621348911311736No Hit
AGACCGGCTATGTATATCGGTTCGACCGGTCCGCGCGGCCTGATGCACTG20.10621348911311736No Hit
AGACCGGCGATGTACATTGGTTCGACCGGTCCGCGCGGCCTGATGCACTG20.10621348911311736No Hit
CGGCCTGGTATGTATATAGGCGGCACCGACGAACGGGCCCTGCACCACCT20.10621348911311736No Hit
CGGCCGGGCATGTATATCGGATCCACCGGCGAGCGCGGCCTGCACCATCT20.10621348911311736No Hit
AGTCCTGGAATGTATATTGGGTCGACGGGTGAGCGCGGTCTTCACCACCT20.10621348911311736No Hit
AGGCCAGGCATGTACATCGGCTCGACCGGAGAGCGTGGTCTGCACCACCT20.10621348911311736No Hit
AGCCCTGGTATGTATATCGGCGGCACTGACGCCAATGCGCTCCATCACCT20.10621348911311736No Hit
CGGCCGGGGATGTACATCGGTTCGACCGGTCCGCGCGGCCTGATGCACTG20.10621348911311736No Hit
CGGCCGGGCATGTATATTGGCTCGACCGATTCGCGCGGCCTCATGCACTG20.10621348911311736No Hit
CGGCCGGCCATGTACATCGGCGGCACCGACGAGTCCGCGATGCATCATCT20.10621348911311736No Hit
AGCCCAGGAATGTATATCGGGTCCACCGGCGAGCGCGGCCTGCACCACCT20.10621348911311736No Hit
AGTCCTGGGATGTACATCGGCTCCACCGGCGAGCGCGGCCTGCACCACCT20.10621348911311736No Hit
CGACCTGCTATGTATATCGGGTCCACCGGCGAGCGCGGCCTGCACCACCT20.10621348911311736No Hit
CGTCCAGGTATGTACATCGGGTCCACCGGCGAGCGCGGCCTGCACCACCT20.10621348911311736No Hit
AGCCCAGGCATGTACATAGGCTCCACGGGGCCGCGTGGCCTGCACCACCT20.10621348911311736No Hit
CGTCCGGGCATGTACATTGGCTCCACCGGCGAGCGCGGCCTGCACCACCT20.10621348911311736No Hit
CGCCCTGCGATGTACATCGGTTCGACCGGTCCGCGCGGCCTGATGCACTG20.10621348911311736No Hit
AGACCGGGTATGTACATCGGCTCGACCGGCGAGCGCGGCCTGCACCACAT20.10621348911311736No Hit
AGGCCGGCTATGTACATCGGCTCGACCGATTCGCGCGGCCTCATGCACTG20.10621348911311736No Hit
CGGCCAGCCATGTATATCGGGTCGAACGGATCGCCCGGGCTCCTGCACTG20.10621348911311736No Hit
ACACCCAAGCAGATCTACATCACGGTAGTTGAGATCGGACTTCATAAGGT20.10621348911311736No Hit
AGGCCAGCGATGTATATCGGTTCGACCGGTCCACGGGGTCTGCATCATCT20.10621348911311736No Hit
AGTCCTGGTATGTATATCGGCGGCACCGACGAGAAGGCTCTGCATCACCT20.10621348911311736No Hit
AGTCCAGCTATGTACATCGGCTCGACCGGCGAGCGCGGCCTGCACCACAT20.10621348911311736No Hit
AGCCCGGGGATGTATATCGGCGACACCGATGACGGCTCGGGCCTGCACCA20.10621348911311736No Hit
AGGCCGGGCATGTATATCGGCTCCACCGACTCCCGCGGCCTCATGCACTG20.10621348911311736No Hit
AGGCCCGGCATGTACATCGGTTCGACCGGTCCACGGGGTCTGCATCATCT20.10621348911311736No Hit
AGTCCTGGCATGTACATAGGCTCGACCGATTCGCGCGGCCTCATGCACTG20.10621348911311736No Hit
AGGCCTGGGATGTATATCGGCTCGACCGATTCGCGCGGCCTCATGCACTG20.10621348911311736No Hit
AGCCCTGCGATGTACATAGGCTCCACGGGGCCGCGCGGTCTGCACCACCT20.10621348911311736No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)