FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_GyrBDve276.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_GyrBDve276.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11217
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCGGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG290.25853615048586964No Hit
AGGCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG200.17830079343853078No Hit
AGGCCGGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG200.17830079343853078No Hit
AGTCCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG190.16938575376660425No Hit
AGGCCGGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG180.16047071409467772No Hit
AGGCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG180.16047071409467772No Hit
AGGCCGGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG180.16047071409467772No Hit
AGGCCGGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG180.16047071409467772No Hit
AGGCCTGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG170.15155567442275117No Hit
AGGCCTGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG170.15155567442275117No Hit
AGGCCAGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG170.15155567442275117No Hit
CGGCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG160.14264063475082464No Hit
AGGCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG160.14264063475082464No Hit
AGGCCGGGGATGTACATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG160.14264063475082464No Hit
AGTCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.1337255950788981No Hit
AGGCCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.1337255950788981No Hit
CGGCCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.1337255950788981No Hit
AGACCAGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.1337255950788981No Hit
AGGCCGGCAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.1337255950788981No Hit
AGGCCAGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.1337255950788981No Hit
AGGCCAGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.1337255950788981No Hit
AGTCCTGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.1337255950788981No Hit
AGACCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.1337255950788981No Hit
AGGCCAGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.1337255950788981No Hit
AGGCCGGGCATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.1337255950788981No Hit
AGGCCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.1337255950788981No Hit
AGTCCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.1337255950788981No Hit
AGTCCGGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.1337255950788981No Hit
AGGCCGGGTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG140.12481055540697157No Hit
AGGCCCGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG140.12481055540697157No Hit
AGGCCAGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG140.12481055540697157No Hit
AGACCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG140.12481055540697157No Hit
AGTCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG140.12481055540697157No Hit
AGTCCGGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG140.12481055540697157No Hit
AGACCTGCTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG140.12481055540697157No Hit
AGTCCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG140.12481055540697157No Hit
AGTCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.11589551573504503No Hit
AGGCCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.11589551573504503No Hit
AGTCCGGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.11589551573504503No Hit
AGGCCTGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.11589551573504503No Hit
AGGCCGGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.11589551573504503No Hit
AGGCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.11589551573504503No Hit
AGGCCTGCAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.11589551573504503No Hit
AGGCCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.11589551573504503No Hit
AGGCCGGCTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG120.10698047606311847No Hit
AGGCCTGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG120.10698047606311847No Hit
AGGCCTGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG120.10698047606311847No Hit
AGACCAGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG120.10698047606311847No Hit
AGTCCGGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG120.10698047606311847No Hit
AGACCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG120.10698047606311847No Hit
AGACCAGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG120.10698047606311847No Hit
AGTCCGGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG120.10698047606311847No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)