FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_GyrBDve271.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_GyrBDve271.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length301
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGACCAGCAATGTATATAGGGTCGACGGGGGAGCGCGGGCTGCACCACCT16.25No Hit
TACCCTTACTATGTTCCTGATTACGCGTCTCGTGGGCTCGAAGATTTCGT16.25No Hit
CGTCCGGCGATGTATATCGGCTCGACCGATTCGCGTGGACTCATGCACTG16.25No Hit
CGACCAGGTATGTATATAGGCGACACCTCCGACGGCACGGGCCTGCACCA16.25No Hit
CGTCCGGGTATGTATATAGGCGACACCTCCGACGGCCCGGGCCTGCACCA16.25No Hit
AGACCAGCTATGTATATAGGCGGCACCGACGAAAAGGCGATGCACCACCT16.25No Hit
AGACCAGGGATGTACATCGGCGATACCGACGACGGATCGGGCCTCCACCA16.25No Hit
CGCCCAGGAATGTACATTGGATCCACTGGTCCCCGCGGTCTGCACCACCT16.25No Hit
CGTCCTGGGATGTACATTGGCTCCACGGGTATCCGCGGCCTGCACCACCT16.25No Hit
CGACCCGCCATGTATATCGGCGACACCGACGACGGTTCCGGCCTGCATCA16.25No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG16.25No Hit
AGGCCGGGGATGTATATCGGCTCCACCGGTGAACGCGGTCTGCACCACCT16.25No Hit
AGGCCGGGTATGTACATCGGCGACACCTCCGACGGCACCGGCCTTCACCA16.25No Hit
AGGCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG16.25No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTT16.25No Hit
CGGCCGGCAATGTATATCGGATCCACGGGTCCGCGCGGTCTCCACCACCT16.25No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)