FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_GyrBDve266.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_GyrBDve266.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12992
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG340.26169950738916253No Hit
AGGCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG330.25400246305418717No Hit
AGGCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG280.21551724137931033No Hit
AGGCCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG250.19242610837438423No Hit
AGACCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG250.19242610837438423No Hit
AGTCCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG230.1770320197044335No Hit
AGGCCGGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG230.1770320197044335No Hit
AGTCCTGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG230.1770320197044335No Hit
AGACCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG220.16933497536945813No Hit
AGGCCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG220.16933497536945813No Hit
AGGCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG220.16933497536945813No Hit
AGGCCGGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG210.16163793103448276No Hit
AGGCCGGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG210.16163793103448276No Hit
AGACCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG210.16163793103448276No Hit
AGTCCGGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG210.16163793103448276No Hit
AGGCCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG200.1539408866995074No Hit
AGACCAGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG190.14624384236453203No Hit
AGCCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG190.14624384236453203No Hit
AGTCCGGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG190.14624384236453203No Hit
AGACCTGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG180.13854679802955666No Hit
CGGCCGGGGATGTACATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG180.13854679802955666No Hit
AGGCCAGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG180.13854679802955666No Hit
AGTCCAGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG180.13854679802955666No Hit
AGGCCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG180.13854679802955666No Hit
AGGCCAGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG170.13084975369458127No Hit
AGGCCTGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG170.13084975369458127No Hit
AGGCCAGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG170.13084975369458127No Hit
AGGCCTGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG170.13084975369458127No Hit
AGTCCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG170.13084975369458127No Hit
AGGCCAGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG170.13084975369458127No Hit
AGGCCGGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG170.13084975369458127No Hit
AGGCCGGGTATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG160.12315270935960591No Hit
AGACCTGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG160.12315270935960591No Hit
AGGCCTGCTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG160.12315270935960591No Hit
AGACCCGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG160.12315270935960591No Hit
AGACCGGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG160.12315270935960591No Hit
AGGCCGGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG160.12315270935960591No Hit
AGGCCGGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG160.12315270935960591No Hit
CGGCCAGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG160.12315270935960591No Hit
AGGCCGGGAATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG160.12315270935960591No Hit
AGGCCAGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.11545566502463055No Hit
CGGCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.11545566502463055No Hit
CGGCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.11545566502463055No Hit
CGGCCTGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.11545566502463055No Hit
CGGCCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.11545566502463055No Hit
AGTCCGGCAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.11545566502463055No Hit
AGGCCCGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.11545566502463055No Hit
AGGCCTGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.11545566502463055No Hit
AGTCCGGGGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.11545566502463055No Hit
AGGCCCGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.11545566502463055No Hit
AGACCGGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.11545566502463055No Hit
AGGCCGGCGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.11545566502463055No Hit
AGGCCTGCTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.11545566502463055No Hit
AGACCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.11545566502463055No Hit
AGCCCGGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG150.11545566502463055No Hit
AGTCCGGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG140.10775862068965517No Hit
AGGCCCGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG140.10775862068965517No Hit
AGGCCTGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG140.10775862068965517No Hit
AGACCTGCGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG140.10775862068965517No Hit
AGGCCGGGTATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG140.10775862068965517No Hit
CGGCCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG140.10775862068965517No Hit
AGTCCCGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG140.10775862068965517No Hit
AGTCCGGCGATGTACATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG140.10775862068965517No Hit
CGACCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG140.10775862068965517No Hit
AGGCCCGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG140.10775862068965517No Hit
AGACCAGGGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG140.10775862068965517No Hit
AGACCGGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG140.10775862068965517No Hit
CGGCCGGGGATGTACATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG140.10775862068965517No Hit
AGTCCAGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.10006157635467981No Hit
AGGCCGGCTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.10006157635467981No Hit
AGGCCAGGGATGTACATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.10006157635467981No Hit
AGTCCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.10006157635467981No Hit
AGGCCGGGTATGTATATCGGATCCACGGGTCCGCGCGGTCTCCACCACCT130.10006157635467981No Hit
AGTCCGGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.10006157635467981No Hit
AGGCCAGGGATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.10006157635467981No Hit
AGTCCGGCTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.10006157635467981No Hit
AGGCCGGGAATGTATATAGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.10006157635467981No Hit
AGGCCGGCAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.10006157635467981No Hit
AGGCCGGGCATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.10006157635467981No Hit
CGGCCTGGAATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.10006157635467981No Hit
CGGCCTGGAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.10006157635467981No Hit
AGGCCTGCGATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.10006157635467981No Hit
AGACCTGGGATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.10006157635467981No Hit
AGTCCTGGTATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.10006157635467981No Hit
AGTCCGGGCATGTATATCGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.10006157635467981No Hit
CGGCCTGGTATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG130.10006157635467981No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)