FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_GyrBDve261.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_GyrBDve261.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5143
Sequences flagged as poor quality0
Sequence length301
%GC63

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGCCGGGGATGTACATCGGCGACACCTCGGATGGCACCGGCCTGCACCA120.233326852031888No Hit
AGGCCGGGGATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA120.233326852031888No Hit
AGGCCGGGCATGTACATTGGCGACACCTCGGATGGCACCGGCCTGCACCA110.21388294769589733No Hit
AGGCCGGGGATGTATATTGGCGACACCTCGGATGGCACCGGCCTGCACCA110.21388294769589733No Hit
AGGCCTGGGATGTATATTGGCGACACCTCGGATGGCACCGGCCTGCACCA100.19443904335990667No Hit
AGTCCGGGGATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA90.174995139023916No Hit
AGTCCTGGTATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA90.174995139023916No Hit
AGGCCGGGGATGTACATTGGCGACACCTCGGATGGCACCGGCCTGCACCA90.174995139023916No Hit
AGGCCGGGTATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA90.174995139023916No Hit
CGGCCGGGGATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA80.15555123468792534No Hit
AGACCTGGTATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA80.15555123468792534No Hit
AGGCCAGGGATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA80.15555123468792534No Hit
AGGCCGGGTATGTATATAGGCGACACCTCGGATGGCACCGGCCTGCACCA70.13610733035193467No Hit
AGACCCGGGATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA70.13610733035193467No Hit
AGGCCTGGGATGTACATCGGCGACACCTCGGATGGCACCGGCCTGCACCA70.13610733035193467No Hit
AGGCCTGGGATGTACATTGGCGACACCTCGGATGGCACCGGCCTGCACCA70.13610733035193467No Hit
AGGCCGGGTATGTACATCGGCGACACCTCGGATGGCACCGGCCTGCACCA70.13610733035193467No Hit
AGGCCAGGCATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA70.13610733035193467No Hit
AGGCCTGGGATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA60.116663426015944No Hit
CGTCCGGGTATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA60.116663426015944No Hit
AGGCCGGGAATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA60.116663426015944No Hit
CGACCGGGTATGTACATCGGCGACACCTCGGATGGCACCGGCCTGCACCA60.116663426015944No Hit
CGGCCGGCAATGTACATTGGCGACACCTCGGATGGCACCGGCCTGCACCA60.116663426015944No Hit
AGGCCTGGCATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA60.116663426015944No Hit
AGGCCCGGGATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA60.116663426015944No Hit
AGACCGGGTATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA60.116663426015944No Hit
AGTCCGGGAATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA60.116663426015944No Hit
CGACCAGGTATGTATATTGGCGACACCTCGGATGGCACCGGCCTGCACCA60.116663426015944No Hit
AGGCCCGGTATGTATATTGGCGACACCTCGGATGGCACCGGCCTGCACCA60.116663426015944No Hit
AGACCTGCGATGTATATCGGCGACACCTCGGATGGCACCGGCCTGCACCA60.116663426015944No Hit
AGTCCGGCCATGTATATTGGCGACACCTCGGATGGCACCGGCCTGCACCA60.116663426015944No Hit
CGTCCGGCGATGTATATTGGCGACACCTCGGATGGCACCGGCCTGCACCA60.116663426015944No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)