FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n01_GyrBATH873.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n01_GyrBATH873.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27
Sequences flagged as poor quality0
Sequence length301
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCCAAGCAGATTTACATCACGGTAGTTGAGATCGGACTTCATAAGGT414.814814814814813No Hit
ACACCCAAGCAGATTTACATCACGGTAGTTGAGATCGGACTTCATAAGGT311.11111111111111No Hit
ACACCCAAGCAGATCTACATCACGGTAGTTGAGATCGGACTTCATAAGGT311.11111111111111No Hit
ACGCCCAAGCAGATCTACATCACGGTAGTTGAGATCGGACTTCATAAGGT27.4074074074074066No Hit
AGGCCCGGGATGTATATAGGCGACACCGACGACGGTTCAGGCCTCCACCA13.7037037037037033No Hit
ACGCCCAAGCAGATCTACATCACGGTAGCTGAGATCGGGCTTCATAAGGT13.7037037037037033No Hit
AGACCAGGGATGTATATCGGCGATACTGACGACGGCTCCGGCCTCCACCA13.7037037037037033No Hit
AGGCCTGCTATGTACATCAGGTGGCCTCCATGGCGTCTGTCTCTTTTACA13.7037037037037033No Hit
CGCCCGCGATGTACATTGGCGATACCGACGACGGATCGGGCCTGCACCAC13.7037037037037033No Hit
CGGCCCGCGATGTACATAGGCGACACGTCCGACGGCACCGGCCTGCACCA13.7037037037037033No Hit
ACGCCCAAGCAGAGTTACATCACGGTAGTTGAGATCGGACTTCATAAGGT13.7037037037037033No Hit
CGGCCTGGGATGTATATTGGCGACACCGACGACGGCTCGGGCCTCCACCA13.7037037037037033No Hit
ACACCCAAGCAGATTTAAATCACGGTAGTTGAGATCGGACTTCATAAGGT13.7037037037037033No Hit
AGACCGGCAATGTATATTGGGTCGAACGGATCGCCCGGGCTCATGCACTG13.7037037037037033No Hit
ACGCCCAAGCAGATCTACACCACGGTAGTTGAGATCGGACTTCATAAGGT13.7037037037037033No Hit
CGCCCTGGTATGTATATCGGCTCCACGGACTCCCGGGGACTCATGCATTG13.7037037037037033No Hit
CGCCCAGGGATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCACCA13.7037037037037033No Hit
AGTCCCGGGATGTATATAGGCGACACCGACGACGGTTCCGGCCTCCACCA13.7037037037037033No Hit
CGCCCGGCAATGTATATCGGCGACACCGATGACGGCTCTGGCCTACATCA13.7037037037037033No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)