FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITSDve915.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITSDve915.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1821
Sequences flagged as poor quality0
Sequence length301
%GC49

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT81944.97528830313015No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT27214.936847885777047No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT18610.214168039538714No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC1297.0840197693574956No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT854.667764964305326No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT271.4827018121911038No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT251.3728720483250962No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT231.2630422844590883No Hit
CGGCTGCGTTCTTCATCGATGCAGGAGCCAAGAGATCCGTTGTTAAAAGT191.043382756727073No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT120.6589785831960462No Hit
CGGCTGCGTTCTTCATCGATGCGGAAGCCAAGAGATCCATTGCTGAAAGT50.2745744096650192No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGGGATCCGTTGTTGAAAGT40.21965952773201539No Hit
CGGCTGCGTTCTTCATCGATGCTGCCGACGATTACTTCCTCTAAATGACC40.21965952773201539No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGCAAGT30.16474464579901155No Hit
CGGCTGCGTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTT30.16474464579901155No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGCAAGT30.16474464579901155No Hit
CGGCTGCGTTCTTCATCGATGCAGGAGCCAAGAGATCCGTTGTTGAAAGT30.16474464579901155No Hit
CGGATGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT30.16474464579901155No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGACAGT30.16474464579901155No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCCGAAAGT30.16474464579901155No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGGTCCGTTGTTGAAAGT30.16474464579901155No Hit
CGGATGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT30.16474464579901155No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGGGATCCGTTGTTGAAAGT30.16474464579901155No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAACGT30.16474464579901155No Hit
CGGCTGCGTTCTTCATCGATGCCGGAGCCAAGAGATCCATTGTTAAAAGT30.16474464579901155No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGCAAGT20.10982976386600769No Hit
CGGCTGCGTTCTTCATCGATGCAGAACGCACTTACTTCCTCTAAATGACC20.10982976386600769No Hit
CGGCTGCGTTCTTCATCGATGCGAGGGCCAAGAGATCCGTTGTTGAAAGT20.10982976386600769No Hit
CGGCTGCGTTCTTCATCGATGCGCGAGCCAAGAGATCCGTTGTTGAAAGT20.10982976386600769No Hit
CGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTT20.10982976386600769No Hit
CGGCTGCGTTCTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTT20.10982976386600769No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGACAGT20.10982976386600769No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGG20.10982976386600769No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAGGAGATCCGTTGTTGAAAGT20.10982976386600769No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGT20.10982976386600769No Hit
CGGCTGCGTTCTTCATCGATACCAGAACCAAGAGATCCGTTGTTGAAAGT20.10982976386600769No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAACGT20.10982976386600769No Hit
CGGCTGCGTTCTTCATAGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT20.10982976386600769No Hit
CGGCTGCGTTCTTCATAGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT20.10982976386600769No Hit
CGGCTGCGTTCTTCATCGATGCGGGAGCCAAGAGATCCGTTGTTGAAAGT20.10982976386600769No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)