FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITSDve913.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITSDve913.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences199
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT6030.15075376884422No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT4321.608040201005025No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC2713.5678391959799No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT157.537688442211055No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT94.522613065326634No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT94.522613065326634No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT42.0100502512562812No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGTTGAAAGT31.507537688442211No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTAAAAGT31.507537688442211No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGT21.0050251256281406No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGGTCCGTTGTTAAAAGT21.0050251256281406No Hit
CGGCTGAGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC10.5025125628140703No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGC10.5025125628140703No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGACAGT10.5025125628140703No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAGGT10.5025125628140703No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGGTCCATTGTTGAAAGT10.5025125628140703No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT10.5025125628140703No Hit
CGGCTGCGTTCTTCATCGATGCCGGAGCCAAGAGATCCATTGTTGAAAGT10.5025125628140703No Hit
CGGCTGCGTTCTTCATCGATGCGGACGATTACTTACTCTAAATGACCAAG10.5025125628140703No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGGTCCGTTGTTGAAAGT10.5025125628140703No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT10.5025125628140703No Hit
CGGCTGCATTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT10.5025125628140703No Hit
ACGCCGGGTGGGTTTTTGTTTGAAGAAGTTTGTGTTTTTACAACAAAAAC10.5025125628140703No Hit
CGGCTGCGTTCTTCATCGACGCGCGAGCCAAGAGATCCGTTGTTGAAAGT10.5025125628140703No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCAC10.5025125628140703No Hit
CGGCTGCGTTCTTCATCGACGCGAGTTACTTCCTCTAAATGACCAAGCCC10.5025125628140703No Hit
CGGCTGCGTTCTTCATCGATGCGGGAGCCAAGAGATCCGTTGTTAAAAGT10.5025125628140703No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAGGT10.5025125628140703No Hit
CGGCTGCGTTCTTCATCGATGCCGACGATTACTTCCTCTAAATGACCAAG10.5025125628140703No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGACCCGTTGTTAAAAGT10.5025125628140703No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTGCTTCCTCTAAATGACCAAGCCC10.5025125628140703No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCCAGAGCTCCGTTGTTGAAAGT10.5025125628140703No Hit
CGGCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGT10.5025125628140703No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)