FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITSDve878.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITSDve878.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13939
Sequences flagged as poor quality0
Sequence length301
%GC59

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT1114079.91964990314943No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT5153.6946696319678596No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT1200.8608938948274626No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT780.5595810316378507No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT740.5308845684769352No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAGGAGATCCGTTGTTGAAAGT600.4304469474137313No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT560.40175048425281584No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGGAAGT520.3730540210919004No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGCTGTTGAAAGT480.344357557930985No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGC470.33718344214075613No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGACAGT440.3156610947700696No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGGTCCGTTGTTGAAAGT440.3156610947700696No Hit
CGGCTGCGTTCTTCATCGATGCCAGGACCAAGAGATCCGTTGTTGAAAGT440.3156610947700696No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT430.30848697897984073No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAACGT420.30131286318961187No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGCAAGT410.29413874739938306No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGGGATCCGTTGTTGAAAGT400.2869646316091542No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTCGAAAGT400.2869646316091542No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAGAGT390.27979051581892533No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAGGT390.27979051581892533No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTCGTTGAAAGT380.27261640002869647No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGACCCGTTGTTGAAAGT360.2582681684482388No Hit
CGGCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGT350.25109405265800994No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCGAGAGATCCGTTGTTGAAAGT300.21522347370686565No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAAGT290.20804935791663678No Hit
CGGCTGCGTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTT230.16500466317526363No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGG230.16500466317526363No Hit
CGGCTGCGTTCTTCATCGATGCCAGAAACAAGAGATCCGTTGTTGAAAGT200.1434823158045771No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGCGATCCGTTGTTGAAAGT190.13630820001434824No Hit
CGGATGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT180.1291340842241194No Hit
CGGCTGCGTTCTTCATAGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT170.12195996843389052No Hit
CGGCTGCGTCCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT160.11478585264366166No Hit
CGGCTGCGTTCTTCATCGATGCTAGAACCAAGAGATCCGTTGTTGAAAGT150.10761173685343282No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCTGTTGTTGAAAGT150.10761173685343282No Hit
CGGCTGCGTTCTTTATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT140.10043762106320396No Hit
CGGCTGCGTTCTTCATCGATGCAGAACCAAGAGATCCGTTGTTGAAAGTT140.10043762106320396No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)