FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITSDve877.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITSDve877.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5857
Sequences flagged as poor quality0
Sequence length301
%GC49

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT303251.767116271128565No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT163927.98360935632576No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT1182.0146832849581697No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT621.0585624039610724No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT510.8707529451937852No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT500.8536793580331228No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCAAAAGT300.5122076148198736No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT240.40976609185589896No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGGGATCCGTTGTTGAAAGT180.3073245688919242No Hit
CGGCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGT180.3073245688919242No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAGAGT160.2731773945705993No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGGAAGT160.2731773945705993No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAGGAGATCCGTTGTTGAAAGT150.2561038074099368No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAGGT130.22195663308861194No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGCTGTTGAAAGT120.20488304592794948No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTCGAAAGT110.187809458767287No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGACCCGTTGTTGAAAGT110.187809458767287No Hit
CGGCTGCGTTCTTCATCGATGCCAGGACCAAGAGATCCGTTGTTGAAAGT110.187809458767287No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGGGATCCGTTGTTGAAAGT100.17073587160662457No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGGTCCGTTGTTGAAAGT100.17073587160662457No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAACGT100.17073587160662457No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAAGT100.17073587160662457No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGT90.1536622844459621No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGC90.1536622844459621No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGCAAGT90.1536622844459621No Hit
CGGCTGCGTTCTTCATCGATGCCAGAAACAAGAGATCCGTTGTTGAAAGT80.13658869728529965No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTCGTTGAAAGT80.13658869728529965No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAGGAGATCCGTTGTTGAAAGT80.13658869728529965No Hit
CGGCCGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT80.13658869728529965No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAGGT80.13658869728529965No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGGAAGT80.13658869728529965No Hit
CGGCTGTGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT70.1195151101246372No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGCTGTTGAAAGT70.1195151101246372No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTCGTTGAAAGT70.1195151101246372No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGC70.1195151101246372No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGCAAGT70.1195151101246372No Hit
CGGCTGCGTTTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTT70.1195151101246372No Hit
CGGCTGCGTTCTTCATCGATGCCAGAATCAAGAGATCCGTTGTTGAAAGT60.10244152296397474No Hit
CGGCTGCGTTCTTCATCGATGCTAGAACCAAGAGATCCGTTGTTGAAAGT60.10244152296397474No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCTGTTGTTGAAAGT60.10244152296397474No Hit
CGGCTGCGTTCTTCATAGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT60.10244152296397474No Hit
CGGCTGCGTCCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT60.10244152296397474No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)