FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITSDve566.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITSDve566.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7105
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT291541.027445460943No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT161022.660098522167488No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT4926.924700914848699No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT3585.038705137227304No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT3524.954257565095004No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT2213.1104855735397607No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT1902.674173117522871No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT861.2104152005629838No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGT170.23926812104152007No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGGTCCATTGTTGAAAGT140.19704433497536944No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGGGATCCATTGTTGAAAGT130.18296973961998592No Hit
CGGCTGCGTTCTTCATCGATGCCAGGGCCAAGAGATCCATTGTTGAAAGT120.1688951442646024No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCATTGTTGAAAGT120.1688951442646024No Hit
CGGCTGCGTTCTTCATCGATGCCGGAGCCAAGAGATCCATTGTTGAAAGT120.1688951442646024No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAACGT110.15482054890921887No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAAGT110.15482054890921887No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGTTGAAAGT100.14074595355383532No Hit
CGGCTGCGTTCTTCATCGATGCGCAGGCCAAGAGATCCGTTGTTGAAAGT100.14074595355383532No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAGGAGATCCATTGTTGAAAGT100.14074595355383532No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGCAAGT90.1266713581984518No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAAATCCGTTGCTGAAAAT90.1266713581984518No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATCGTTGAAAGT90.1266713581984518No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAGGT80.11259676284306826No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGCAAGT80.11259676284306826No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCGAGAGATCCATTGTTGAAAGT80.11259676284306826No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGCTGTTGAAAGT80.11259676284306826No Hit
CGGTTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT80.11259676284306826No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)