FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITSDve564.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITSDve564.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences710
Sequences flagged as poor quality0
Sequence length301
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT34348.30985915492958No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT8411.830985915492958No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT486.760563380281689No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT395.492957746478874No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT294.084507042253521No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT182.535211267605634No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT172.3943661971830985No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT91.267605633802817No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA60.8450704225352111No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGT50.7042253521126761No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGT40.5633802816901409No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGGTCCGTTGTTGAAAGT40.5633802816901409No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGC40.5633802816901409No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAGAGT30.42253521126760557No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCCGAAAGT30.42253521126760557No Hit
CGGCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGT30.42253521126760557No Hit
CGGCTCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTT20.28169014084507044No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAGGT20.28169014084507044No Hit
CGGTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTT20.28169014084507044No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGGGATCCGTTGTTGAAAGT20.28169014084507044No Hit
CGGCTGCGTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTT20.28169014084507044No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGC20.28169014084507044No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGCAAGT20.28169014084507044No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAACGT20.28169014084507044No Hit
CGGCTGCGTTCTTCATCGATGCGTGAGCCAAGAGATCCGTTGTTGAAAGT20.28169014084507044No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGGAAGT20.28169014084507044No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAGGT20.28169014084507044No Hit
CGGTTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTTATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGCAAGT10.14084507042253522No Hit
CGGCTGAGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAAGT10.14084507042253522No Hit
ACACCGTGGAGACCGCCGGACACGGCGTAGGCGCCGCCGCCGAACTTGCC10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGATGTTAAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCAGAACCAAGAGATCCGTTGTTGAAAGTT10.14084507042253522No Hit
CGGCTGTGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAGGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTGTGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAAAAGT10.14084507042253522No Hit
CGGCTGCGTCCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCCAGTACCAAGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
ACTCCATGTAGGCCTCCAGAGGTTTTGTAGTTTCCCTTGCCGCCATTCTC10.14084507042253522No Hit
CGGCTGCGTTCTTCGTCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTACGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGAGCGAGAGCCAAGAGATCCGTTGTTGAAAGTT10.14084507042253522No Hit
CGGCTGCGTTCTTCACCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGC10.14084507042253522No Hit
CGTCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCCTCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGATATCCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCGAGGGCCAAGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGCAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCTAGAACCAAGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
AGCCTGACATTCCCTTCTTAAAGGTGTGAGGTAGTAAACGAAAAAAGATT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGTGCGAGAACCAAGAGATCCGTTGTTGAAAGTT10.14084507042253522No Hit
CGGCTGCGTTCTTCACCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCCAGGACCAAGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTTTTGAAAGTT10.14084507042253522No Hit
CGGCTGAGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTAAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGGGATCCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTACAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCCAGATCCAAGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGGTCCGTTGCTGAAAGT10.14084507042253522No Hit
CGGATGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT10.14084507042253522No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGGGACT10.14084507042253522No Hit
TGAGTACCCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGACAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCCCGAACCAAGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
CCGCTGCGCTCTTCATCCCTCCCCCCACCACCCCCTCCCTCCCTCCCCCC10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATACCAGAACCAAGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAACT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGAGCCAGAACCAAGAGATCCGTTGTTGAAAGTT10.14084507042253522No Hit
CGGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAG10.14084507042253522No Hit
CGGCGCGTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT10.14084507042253522No Hit
CGGCTGCATTCTTCATCGATGCCAGAACCAAGGGATCCGTTGTTGAAAGT10.14084507042253522No Hit
TGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAGGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATTCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAGGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCCGGAGCCAAGAGATCCATTGTTGAAAGT10.14084507042253522No Hit
CGGCTGCGTTTTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTGCGTCTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT10.14084507042253522No Hit
CGGTTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTT10.14084507042253522No Hit
CCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT10.14084507042253522No Hit
TGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTGCCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAG10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAAAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGCTGAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC10.14084507042253522No Hit
CGGCTACGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGG10.14084507042253522No Hit
CGGCTGTGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTCGAAAGT10.14084507042253522No Hit
TGAGTAACCGCAACATCGTGAAAACACAGTTATCCATACTAGTTAGAGAA10.14084507042253522No Hit
CGGCTGCGTTCTTCATCGATGCAAGAGTCTAGAGATCCATTGGTATAAGT10.14084507042253522No Hit
CGGCTGAGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT10.14084507042253522No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)