FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITSDve561.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITSDve561.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2990
Sequences flagged as poor quality0
Sequence length301
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT57619.26421404682274No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT47615.91973244147157No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT37312.474916387959867No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT1816.053511705685619No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT1214.046822742474916No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAAGT1193.9799331103678925No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT953.177257525083612No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT802.6755852842809364No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGT421.4046822742474918No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAAATCCGTTGCTGAAAGT290.9698996655518395No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTAAAAGT280.9364548494983277No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGCAAGT150.5016722408026756No Hit
CGGCTGCGTTCTTCATCGATGCGGGAGCCAAGAGATCCGTTGTTGAAAGT150.5016722408026756No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGGTCCGTTGTTGAAAGT140.46822742474916385No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGGGATCCGTTGTTGAAGGT120.4013377926421404No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAAAGT110.36789297658862874No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTACAAGT90.3010033444816053No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGCAAGT90.3010033444816053No Hit
CGGCTGCGTTCTTCATCGATGCCAGAAACAAGAGATCCGTTGTTGAAAGT80.26755852842809363No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAACGT80.26755852842809363No Hit
CGGCTGCGTTCTTCATCGATGCTAGAACCAAGAGATCCGTTGTTAAAAGT70.23411371237458192No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGACAGT70.23411371237458192No Hit
CGGCTGCGTTCTTCATCGATGCGTGAGCCAAGAGATCCGTTGTTGAAAGT70.23411371237458192No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAACGT60.2006688963210702No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGGGATCCGTTGTTGAAAGT60.2006688963210702No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT60.2006688963210702No Hit
CGGATGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT60.2006688963210702No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAACGT60.2006688963210702No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTACAAGT50.16722408026755853No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGGGATCCGTTGTTAAAAGT50.16722408026755853No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCACGAGATCCGTTGTTGAAAGT50.16722408026755853No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTCAAAGT50.16722408026755853No Hit
CGGCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGT50.16722408026755853No Hit
CGGCTGCGTTCTTCATCGATGCCAGAAACAAGAGATCCGTTGTTAAAAGT50.16722408026755853No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGGAAGT50.16722408026755853No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAAAAGT50.16722408026755853No Hit
CGGCTGCGTTCTTCATCGATGCCAGGACCAAGAGATCCGTTGTTGAAAGT50.16722408026755853No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAGGT50.16722408026755853No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAACGT40.13377926421404682No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAGAGT40.13377926421404682No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAGAAGT40.13377926421404682No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGACAGT40.13377926421404682No Hit
CGGCAGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT40.13377926421404682No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAACAGT40.13377926421404682No Hit
CGGCTGCGTTCTTCATCGATGCGAGAAACAAGAGATCCGTTGTTGAAAGT40.13377926421404682No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGACAGT40.13377926421404682No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATACGTTGTTGAAAGT40.13377926421404682No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTAAAAGT40.13377926421404682No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAGAGT40.13377926421404682No Hit
CGGCTGCGTTCTTCATAGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT40.13377926421404682No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTCGAAAGT40.13377926421404682No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGCGATCCGTTGTTAAAAGT40.13377926421404682No Hit
CGGCTGAGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT40.13377926421404682No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAACAGT40.13377926421404682No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGACCCGTTGTTAAAAGT40.13377926421404682No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGT30.1003344481605351No Hit
CGGCTGCGTTCTCCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT30.1003344481605351No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGACAGT30.1003344481605351No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGCTGTTGAAAGT30.1003344481605351No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAGGT30.1003344481605351No Hit
CGGCTGCGTTCTTCATCGATGCGAGGGCCAAGAGATCCGTTGTTAAAAGT30.1003344481605351No Hit
CGGCTGCGTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGTT30.1003344481605351No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCACTGTTGAAAGT30.1003344481605351No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGGGATCCGTTGTTGAAAGT30.1003344481605351No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAACGT30.1003344481605351No Hit
CGGTTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT30.1003344481605351No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCCAGAGATCCGTTGTTGAAAGT30.1003344481605351No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCGAGAGATCCGTTGTTAAAAGT30.1003344481605351No Hit
CGGCTGCGTTCTTCATCGATGCGGGAGCCAAGAGATCCGTTGTTAAAAGT30.1003344481605351No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTCGTTGAAAGT30.1003344481605351No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAGAGT30.1003344481605351No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAGAGT30.1003344481605351No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAGGAGATCCGTTGCTGAAAGT30.1003344481605351No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCTGTTGTTGAAAGT30.1003344481605351No Hit
CGGCTGAGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT30.1003344481605351No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGATAGT30.1003344481605351No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGACCCGTTGTTGAAAGT30.1003344481605351No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGGGATCCGTTGTTAAAAGT30.1003344481605351No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)