FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITSDve551.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITSDve551.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1228
Sequences flagged as poor quality0
Sequence length301
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT42134.28338762214984No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT27122.068403908794785No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT14211.563517915309445No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAAAGT514.153094462540716No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT463.7459283387622153No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT393.175895765472313No Hit
CGGCTGCGTTCTTCATCGATGCTAGAACCAAGAGATCCGTTGTTAAAAGT191.5472312703583062No Hit
CGGCTGCGTTCTTCATCGATGCCAGGACCAAGAGATCCGTTGTTGAAAGT171.3843648208469055No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT171.3843648208469055No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAGAGT70.5700325732899023No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCTGTTGTTAAAAGT50.40716612377850164No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCTGTTGTTGAAAGT50.40716612377850164No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGGAAGT50.40716612377850164No Hit
CGGCCGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT40.32573289902280134No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAGGAGATCCGTTGTTGAAAGT30.24429967426710095No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAGGT30.24429967426710095No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATTCGTTGTTGAAAGT30.24429967426710095No Hit
CGGCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGT30.24429967426710095No Hit
CGGCTGCGTTCTTCATCGACGCCAGAACCAAGAGATCCGTTGTTGAAAGT20.16286644951140067No Hit
CGGCTGCGTTCTTCATCGATGCAGAGCCAAGAGATCCGTTGTTGAAAGTT20.16286644951140067No Hit
CGGCTGCGTTCTTCATCGATGCCAGAATCAAGAGATCCGTTGTTGAAAGT20.16286644951140067No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGGGATCCGTTGTTGAAAGT20.16286644951140067No Hit
CGGCTGCGTTCTTCATCAATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT20.16286644951140067No Hit
CGGCTGCGTTCTTCATCGATGCCAGAAACAAGAGATCCGTTGTTGAAAGT20.16286644951140067No Hit
CGGCTGCGTTCTTCATCGAGCCAGAACCAAGAGATCCGTTGTTGAAAGTT20.16286644951140067No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTCGTTGAAAGT20.16286644951140067No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGC20.16286644951140067No Hit
CGGCTGCGTTCTTCATCGTGCCAGAACCAAGAGATCCGTTGTTGAAAGTT20.16286644951140067No Hit
CGGCTGCGTTCTTCTCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTT20.16286644951140067No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAGGT20.16286644951140067No Hit
GGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTT20.16286644951140067No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGT20.16286644951140067No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGACAGT20.16286644951140067No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCGAGAGATCCGTTGTTGAAAGT20.16286644951140067No Hit
CGGCTGCGTTCTTCATCGATGACAGAGCCAAGAGATCCGTTGTTGAAAGT20.16286644951140067No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCTAGAGATCCGTTGTTGAAAGT20.16286644951140067No Hit
CGGCTGCGCTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT20.16286644951140067No Hit
CGGCTGCGTTCTTCATCGATGCCAAAACCAAGAGATCCGTTGTTGAAAGT20.16286644951140067No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAGAGT20.16286644951140067No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAACGT20.16286644951140067No Hit
CGGCTGCGTTCTTCATAGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT20.16286644951140067No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACTAAGAGATCCGTTGTTGAAAGT20.16286644951140067No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)