FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITSDve543.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITSDve543.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1505
Sequences flagged as poor quality0
Sequence length301
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT72548.17275747508305No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT21614.352159468438538No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAAAGT835.514950166112957No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT644.25249169435216No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT533.5215946843853816No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT392.5913621262458473No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT251.6611295681063125No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT140.9302325581395349No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTTAAAGT120.7973421926910298No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGC110.7308970099667774No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAGGT110.7308970099667774No Hit
CGGCCGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT50.33222591362126247No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAGGT50.33222591362126247No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGCTGAAAGT50.33222591362126247No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCTAGAGATCCGTTGTCAAAAGT40.26578073089701No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGCAAGT40.26578073089701No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAGAGT40.26578073089701No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGGAAGT40.26578073089701No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGACCCGTTGTTGAAAGT40.26578073089701No Hit
CGGCTGCGTTCTTCATAGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT30.19933554817275745No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATTCGTTGTTGAAAGT30.19933554817275745No Hit
CGGCTGCGTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTT30.19933554817275745No Hit
TGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT30.19933554817275745No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAGAGT30.19933554817275745No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGACAGT30.19933554817275745No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGGTCCGTTGTTGAAAGT30.19933554817275745No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAGGAGATCCGTTGTTGAAAGT30.19933554817275745No Hit
CGGCTGCGTTCTTCATCGACGCCAGAGCCAAGAGATCCGTTGTTGAAAGT30.19933554817275745No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGGGATCCGTTGTTGAAAGT30.19933554817275745No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTCGTTGAAAGT30.19933554817275745No Hit
CGGCTGCGTTCTTCATTGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT30.19933554817275745No Hit
CGGCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGT30.19933554817275745No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAGAGT20.132890365448505No Hit
CGGCTGCGTTCTTCATCGATGCAGAGCCAAGAGATCCGTTGTTGAAAGTT20.132890365448505No Hit
CGGCTGCGTTCTTCATCGGTGCCAGAGCCAAGAGATCCGTTGTTGAAAGT20.132890365448505No Hit
CGGCTGCGTTCTTCATCGATGCCAGGACCAAGAGATCCGTTGTTGAAAGT20.132890365448505No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAGGAGATCCGTTGTTAAAAGT20.132890365448505No Hit
CGGCTGCGTTTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTT20.132890365448505No Hit
CGGCTGCGTTCTTCATCATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTT20.132890365448505No Hit
CGGCTGCGTTCTTCATCGATGCCAGTGCCAAGAGATCCGTTGTTGAAAGT20.132890365448505No Hit
CGGCTGCGTTCTTTATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT20.132890365448505No Hit
CGGCTGCGTTCTTCATCCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAG20.132890365448505No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCGAGAGATCCGTTGTTGAAAGT20.132890365448505No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGGCAGT20.132890365448505No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGCTGTTGAAAGT20.132890365448505No Hit
CGGCTGCGTTCTTCGTCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT20.132890365448505No Hit
CGGCTGCGTTCTTCATCGATGTCAGAGCCAAGAGATCCGTTGTTGAAAGT20.132890365448505No Hit
CGGCTGCGTTCTTTATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT20.132890365448505No Hit
CGGCTGCGTTCTTCATCGATGCGAGTGCCAAGAGATCCGTTGTTAAAAGT20.132890365448505No Hit
CGGCTGCGTTCTTCATCGATGCCGGAGCCAAGAGATCCGTTGTTGAAAGT20.132890365448505No Hit
CGGCTGCGTCCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT20.132890365448505No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTCGAAAGT20.132890365448505No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGGAAGT20.132890365448505No Hit
GCGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAG20.132890365448505No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGTGATCCGTTGTTGAAAGT20.132890365448505No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA20.132890365448505No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)