FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITSDve518.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITSDve518.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2987
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT82427.586206896551722No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT56318.84834281888182No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT45315.165718111817878No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT2658.87177770338132No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT1836.126548376297288No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT712.3769668563776363No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT230.7700033478406427No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGT160.5356545028456646No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAAATCCGTTGCTGAAAGT150.5021760964178106No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT130.43521928356210243No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCCGAAAGT120.4017408771342484No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAACGT90.3013056578506863No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGT80.2678272514228323No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAACGT70.2343488449949782No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAGGT70.2343488449949782No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAAAGT60.2008704385671242No Hit
CGGCTGAGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT60.2008704385671242No Hit
CGGATGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT60.2008704385671242No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGCAAGT60.2008704385671242No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAACAGT60.2008704385671242No Hit
CGGCTGCGTTCTTCATCGATGCCAGAAACAAGAGATCCGTTGTTGAAAGT50.16739203213927017No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGCAAGT50.16739203213927017No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGGAAGT50.16739203213927017No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTATGAGT50.16739203213927017No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAGGT50.16739203213927017No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGCAAGT40.13391362571141616No Hit
CGGCTGCGTTCTTCATCGATGCGCGAGCCAAGAGATCCGTTGTTGAAAGT40.13391362571141616No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGCTGAAAGT40.13391362571141616No Hit
CGGCTGCGTTCTTCATAGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT40.13391362571141616No Hit
CGGCTGAGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT40.13391362571141616No Hit
CGGCTGCGTTCTTCATAGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT40.13391362571141616No Hit
CGGCTGCGTTCTTCATCGATGCGCAGGCCAAGAGATCCGTTGTTGAAAGT40.13391362571141616No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAGGAGATCCGTTGTTGAAAGT40.13391362571141616No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTCGAAAGT40.13391362571141616No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGACAGT40.13391362571141616No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCACGAGATCCGTTGTTGAAAGT30.1004352192835621No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAGGAGATCCGTTGTTAAAAGT30.1004352192835621No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGACAGT30.1004352192835621No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGC30.1004352192835621No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCGAGAGATCCGTTGTTGAAAGT30.1004352192835621No Hit
CGGCTGCGTTCTTCATCGATGCAAGAGCCAAGAGATCCGTTGTTAAAAGT30.1004352192835621No Hit
CGGCTGCGTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGTT30.1004352192835621No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCTGTTGTTGAAAGT30.1004352192835621No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGCTGAAAGT30.1004352192835621No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGGAAGT30.1004352192835621No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAAGGT30.1004352192835621No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGCGATCCGTTGTTGAAAGT30.1004352192835621No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGGGATCCGTTGTTAAAAGT30.1004352192835621No Hit
CGGCTGCGTTCTTCATCGATGCCAGGACCAAGAGATCCGTTGTTGAAAGT30.1004352192835621No Hit
CGGCTGCGTTCTTCATCGAGCCAGAACCAAGAGATCCGTTGTTGAAAGTT30.1004352192835621No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAGAGT30.1004352192835621No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCAGTTGTTGAAAGT30.1004352192835621No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAGAGT30.1004352192835621No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAGGT30.1004352192835621No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGGGATCCGTTGTTGAAAGT30.1004352192835621No Hit
CGGCTGCGTTCTTCATCGATGCGGGAGCCAAGAGATCCGTTGTTAAAAGT30.1004352192835621No Hit
CGGCTGCGTTCTTCATCGATGCGGGAGCCAAGAGATCCGTTGTTGAAAGT30.1004352192835621No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)