FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITSDve497.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITSDve497.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5569
Sequences flagged as poor quality0
Sequence length301
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT284050.996588256419464No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT98917.759023163943258No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT4187.505835877177231No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT2223.986353025677859No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT1152.0650026934817745No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT891.5981325193032863No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT691.2390016160890645No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTAAAAGT290.5207398096606213No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGCAAGT160.2873047225713773No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAGGT160.2873047225713773No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAACGT150.2693481774106662No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGT150.2693481774106662No Hit
CGGCTGCGTTCTTCATCGATGCCGGAGCCAAGAGATCCGTTGTTGAAAGT140.2513916322499551No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGGAAGT140.2513916322499551No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGGGATCCGTTGTTGAAAGT130.23343508708924404No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGC120.21547854192853294No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGACAGT110.19752199676782187No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTCGAAAGT110.19752199676782187No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGGTCCGTTGTTGAAAGT110.19752199676782187No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCGAGAGATCCGTTGTTGAAAGT100.1795654516071108No Hit
CGGCTGCGTTCTTCATAGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT100.1795654516071108No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGCTGTTGAAAGT80.14365236128568865No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTCGTTGAAAGT80.14365236128568865No Hit
CGGCTGCGTTCTTCATCGATGCCAGGGCCAAGAGATCCGTTGTTGAAAGT80.14365236128568865No Hit
CGGATGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT80.14365236128568865No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGC70.12569581612497754No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGCTGAAAGT70.12569581612497754No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAGGT70.12569581612497754No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGGAAGT70.12569581612497754No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGCTGAAAGT60.10773927096426647No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGACCCGTTGTTGAAAGT60.10773927096426647No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGCAAGT60.10773927096426647No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCTAAGAGATCCGTTGTTGAAAGT60.10773927096426647No Hit
CGGCTGCGTTCTTCATCGATGCTAGAGCCAAGAGATCCGTTGTTGAAAGT60.10773927096426647No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCGAGAGATCCGTTGTTGAAAGT60.10773927096426647No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAGAGT60.10773927096426647No Hit
CGGCTGCGTTCTTCATCGATGCGCAGGCCAAGAGATCCGTTGTTGAAAGT60.10773927096426647No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT60.10773927096426647No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)