FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITSDve487.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITSDve487.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4253
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT163938.537502939101806No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT51312.06207383023748No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT48611.42722783917235No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT46911.027509992946156No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT2576.042793322360686No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT1583.715024688455208No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT400.940512579355749No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTAAAAGT360.846461321420174No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCCGAAAGT280.6583588055490243No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTAAAAGT270.6348459910651305No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGT220.5172819186456619No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAAATCCGTTGCTGAAAGT150.3526922172584058No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT150.3526922172584058No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCAAAAGT120.28215377380672463No Hit
CGGCTGCGTTCTTCATCGATGCGAGGACCAAGAGATCCGTTGTTGAAAGT70.16458970138725607No Hit
CGGCTGCGTTCTTCATCGATGCGAGAAACAAGAGATCCGTTGTTGAAAGT60.14107688690336231No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTCGTTGAAAGT60.14107688690336231No Hit
CGGATGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT60.14107688690336231No Hit
CGGCTGCGTTCTTCATCGATGCGGGAACCAAGAGATCCGTTGTTGAAAGT60.14107688690336231No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA60.14107688690336231No Hit
CGGCTGCGTTCTTCATTGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT60.14107688690336231No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGC50.11756407241946862No Hit
CGGCTGCGTCCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT50.11756407241946862No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGT50.11756407241946862No Hit
CGGCTGCGTTCTTCATAGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT50.11756407241946862No Hit
CGGCTGCGTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTT50.11756407241946862No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGGGATCCGTTGTTAAAAGT50.11756407241946862No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGCTGAAAGT50.11756407241946862No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGGAAGT50.11756407241946862No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGGGATCCGTTGTTGAAAGT50.11756407241946862No Hit
CGGCCGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT50.11756407241946862No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)