FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITSDve480.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITSDve480.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4500
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT141531.444444444444446No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT138330.733333333333334No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT53811.955555555555556No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT3567.9111111111111105No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT1523.3777777777777773No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT410.9111111111111112No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT240.5333333333333333No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT150.33333333333333337No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGC90.2No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTCGAAAGT80.17777777777777778No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGGTCCGTTGTTAAAAGT80.17777777777777778No Hit
CGGCTGCGTTCTTCATCGATGCGAGGGCCAAGAGATCCGTTGTTAAAAGT70.15555555555555556No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGGGATCCGTTGTTGAAAGT70.15555555555555556No Hit
CGGCTGCGTTCTTCATCGATGCCAGGACCAAGAGATCCGTTGTTGAAAGT70.15555555555555556No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAGGT70.15555555555555556No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTAAAAGT70.15555555555555556No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCGAGAGATCCGTTGTTAAAAGT70.15555555555555556No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAAGT60.13333333333333333No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAGAGT50.1111111111111111No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAGAGT50.1111111111111111No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAGGAGATCCGTTGTTAAAAGT50.1111111111111111No Hit
CGGCTGCGTTCTTCATCGATGCCAGAAACAAGAGATCCGTTGTTGAAAGT50.1111111111111111No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAGGAGATCCGTTGTTGAAAGT50.1111111111111111No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGT50.1111111111111111No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTACAAGT50.1111111111111111No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAACGT50.1111111111111111No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAAAAGT50.1111111111111111No Hit
CGGCTGCGTTCTTTATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT50.1111111111111111No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGGTCCGTTGTTGAAAGT50.1111111111111111No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCCGAAAGT50.1111111111111111No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)