FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITSChi471.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITSChi471.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1334
Sequences flagged as poor quality0
Sequence length301
%GC54

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT63047.22638680659671No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAAAGT19914.917541229385305No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC1198.920539730134932No Hit
CGGCTGCGTTCTTCATCGATGCTGCCGACGATTACTTCCTCTAAATGACC685.097451274362818No Hit
CGGCTGCGTTCTTCATCGATGCCGACGATTACTTCCTCTAAATGACCAAG282.0989505247376314No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT171.2743628185907045No Hit
CGGCTGCGTTCTTCATCGATGCTAGAACCAAGAGATCCGTTGTTAAAAGT171.2743628185907045No Hit
CGGCTGCGTTCTTCATCGATGCGAGATACTTCCTCTAAATGACCAAGCCC151.1244377811094453No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCTGTTGTTGAAAGT70.5247376311844079No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGGGATCCGTTGTTGAAAGT50.3748125937031484No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGCAAGT50.3748125937031484No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTCGAAAGT50.3748125937031484No Hit
CGGCTGCGTTCTTCATCGATGCAGAACCAAGAGATCCGTTGTTGAAAGTT40.29985007496251875No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGGGATCCGTTGTTAAAAGT40.29985007496251875No Hit
CGGCTGCGTTCTTCATCGATGCCAGGACCAAGAGATCCGTTGTTGAAAGT40.29985007496251875No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAGGT40.29985007496251875No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGGTCCGTTGTTAAAAGT40.29985007496251875No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAACGT40.29985007496251875No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA40.29985007496251875No Hit
CGGCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGT40.29985007496251875No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAGAGT30.22488755622188905No Hit
CGGCTGCGTTCTTCATCGATGCGAGTACTTCCTCTAAATGACCAAGCCCT30.22488755622188905No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT30.22488755622188905No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGACAGT30.22488755622188905No Hit
CGGCTGCGTTCTTCATCGATGCTAGAACCAAGAGATCCGTTGTTGAAAGT30.22488755622188905No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGGTCCGTTGTTGAAAGT30.22488755622188905No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAAGGT30.22488755622188905No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAAGT20.14992503748125938No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTAGTTGAAAGT20.14992503748125938No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAGAGT20.14992503748125938No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT20.14992503748125938No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGACCCGTTGTTGAAAGT20.14992503748125938No Hit
CGGCTGCGTTCTTCATCGATGCCGGAGCCAAGAGATCCGTTGTTAAAAGT20.14992503748125938No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTCGTTGAAAGT20.14992503748125938No Hit
CGGCTGCGTTCTTCATCGATGCTCCGACGATTACTTCCTCTAAATGACCA20.14992503748125938No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTCGTTAAAAGT20.14992503748125938No Hit
CGGCTGAGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAAAGT20.14992503748125938No Hit
CGGCCGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT20.14992503748125938No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGTCAAGAGATCCGTTGTTAAAAGT20.14992503748125938No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATTCGTTGTTGAAAGT20.14992503748125938No Hit
CGGCTGCGTTCTTCATCGATGCCGACGCTTACTTCCTCTAAATGACCAAG20.14992503748125938No Hit
CGGCTGCGTTCTTCATCGATGCGATTACTTCCTCTAAATGACCAAGCCCT20.14992503748125938No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGGAAGT20.14992503748125938No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)