FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITSChi470.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITSChi470.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1832
Sequences flagged as poor quality0
Sequence length301
%GC55

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT109159.55240174672489No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAAAGT1689.170305676855897No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC1126.11353711790393No Hit
CGGCTGCGTTCTTCATCGATGCTGCCGACGATTACTTCCTCTAAATGACC482.6200873362445414No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT412.2379912663755457No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTCGAAAGT221.2008733624454149No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACTAAGAGATCCGTTGTTGAAAGT201.0917030567685588No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT191.037117903930131No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTCGTTGAAAGT100.5458515283842794No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCGAGAGATCCGTTGTTGAAAGT90.49126637554585156No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAAGT80.43668122270742354No Hit
CGGCTGCGTTCTTCATCGATGCCGACGATTACTTCCTCTAAATGACCAAG80.43668122270742354No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGC70.38209606986899564No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGGGATCCGTTGTTGAAAGT70.38209606986899564No Hit
CGGCTGCGTTCTTCATCGATGCAGAACGCAGCCGTTACTTCCTCTAAATG70.38209606986899564No Hit
CGGCTGCGTTCTTCATCGATGCAGAACCAAGAGATCCGTTGTTGAAAGTT60.32751091703056767No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA60.32751091703056767No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGGAAGT50.2729257641921397No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT50.2729257641921397No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAGAGT40.21834061135371177No Hit
CGGCTGCGTTCTTCATCGATGCCAGAAACAAGAGATCCGTTGTTGAAAGT40.21834061135371177No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAGGAGATCCGTTGTTGAAAGT40.21834061135371177No Hit
CGGCTGCGTTCTTCATCGATGCTAGAACCAAGAGATCCGTTGTTGAAAGT40.21834061135371177No Hit
CGGCTGCGTTCTTCATCGATGCCAGGACCAAGAGATCCGTTGTTGAAAGT40.21834061135371177No Hit
CGGCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGT40.21834061135371177No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGCTGTTGAAAGT30.16375545851528384No Hit
CGGCTACGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT30.16375545851528384No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAACGT30.16375545851528384No Hit
CGGCTGCGTTCTTCATCGATGCGGGTTACTTCCTCTAAATGACCAAGCCC30.16375545851528384No Hit
CGGCTGAGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT30.16375545851528384No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTAGAAAGT30.16375545851528384No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGACCCGTTGTTGAAAGT30.16375545851528384No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGCAAGT30.16375545851528384No Hit
CGGCTGCATTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT30.16375545851528384No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAGGT30.16375545851528384No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGGTCCGTTGTTGAAAGT30.16375545851528384No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGCTGTTAAAAGT20.10917030567685589No Hit
CGGCGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTT20.10917030567685589No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGTAAGT20.10917030567685589No Hit
CGGCTGCGTTCCTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT20.10917030567685589No Hit
CGGCTGCGTTCTTCATCGATGCTGCCGACGGTTACTTCCTCTAAATGACC20.10917030567685589No Hit
CGGCTGCGTTCTTCATCGATGCCTGAACCAAGAGATCCGTTGTTGAAAGT20.10917030567685589No Hit
CGGCTGCCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAG20.10917030567685589No Hit
CAGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT20.10917030567685589No Hit
CGGCTGCGTTCTTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAG20.10917030567685589No Hit
CGGCTGCGTTCTTCATCGATGCGAGATACTTCCTCTAAATGACCAAGCCC20.10917030567685589No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAAAGC20.10917030567685589No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCATTGTTAAAAGT20.10917030567685589No Hit
CGGCTGCGTCCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT20.10917030567685589No Hit
CGGCTGCGTTCTTCATCGATGCCAGTACCAAGAGATCCGTTGTTGAAAGT20.10917030567685589No Hit
CGGCTGCTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTT20.10917030567685589No Hit
TGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT20.10917030567685589No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)