FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITSChi461.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITSChi461.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length301
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA545.45454545454545No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC19.090909090909092No Hit
ACCCCGTGTAGTCCTCCTGACACCTGGTAGGCGCCCTCCTCGAACTTGCC19.090909090909092No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT19.090909090909092No Hit
AACATAATTACTCGTCGAGGAAAATAGCGATGTTACAAATGTTCAATAAT19.090909090909092No Hit
ACACCGTGCAGGCCGCCGGAGACCTTGTAGCCGCCACCGTCGCCGAACTT19.090909090909092No Hit
TGAGTAGCCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA19.090909090909092No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)