FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITSChi449.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITSChi449.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3761
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT140137.25073118851369No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT89623.823451209784633No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT38410.210050518479127No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT2205.849508109545334No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT852.2600372241425153No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT631.6750864131879821No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAACT551.4623770273863335No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT421.1167242754586546No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT360.9571922361074183No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGT160.42541877160329705No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGT90.23929805902685458No Hit
CGGCTGCGTTCTTCATCGATGCGAGGGCCAAGAGATCCGTTGTTAAAAGT90.23929805902685458No Hit
CGGCTGCGTTCTTCATCGATGCGGGAGCCAAGAGATCCGTTGTTAAAAGT90.23929805902685458No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAGAGT80.21270938580164853No Hit
CGGCTGCGTTCTTCATCGATGCGTGAGCCAAGAGATCCGTTGTTGAAAGT80.21270938580164853No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCCGAAAGT80.21270938580164853No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGGTCCGTTGTTGAAAGT80.21270938580164853No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAGGAGATCCGTTGTTAAAAGT70.18612071257644244No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGGGATCCGTTGTTAAAAGT70.18612071257644244No Hit
CGGCTGCGTTCTTCATCGATGCCAGGACCAAGAGATCCGTTGTTGAAAGT70.18612071257644244No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAGGT70.18612071257644244No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAAATCCGTTGTTAAAAGT60.15953203935123636No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTCGCTGAAAGT60.15953203935123636No Hit
CGGCTGCGTTCTTCATAGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT60.15953203935123636No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCTGTTGTTAAAAGT60.15953203935123636No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGGGATCCGTTGTTGAAAGT60.15953203935123636No Hit
CGGCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGT60.15953203935123636No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGC50.1329433661260303No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAGGAGATCCGTTGTTGAAAGT50.1329433661260303No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGCTGTTAAAAGT50.1329433661260303No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAAAAGT50.1329433661260303No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGACCCGTTGTTAAAAGT50.1329433661260303No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCGAGAGATCCGTTGTTAAAAGT50.1329433661260303No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGT40.10635469290082426No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGCTGTTGAAAGT40.10635469290082426No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGC40.10635469290082426No Hit
CGGCTGCGTTCTTCATCGATGCAAGAGCCAAGAGATCCGTTGTTAAAAGT40.10635469290082426No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGGAAGT40.10635469290082426No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA40.10635469290082426No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAGGAGATCCGTTGTTGAAAGT40.10635469290082426No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTAAAAGT40.10635469290082426No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGGTCCGTTGTTAAAAGT40.10635469290082426No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTCGTTAAAAGT40.10635469290082426No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)