FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITSChi426.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITSChi426.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2680
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT87432.61194029850746No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT64724.14179104477612No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT39814.850746268656717No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT2147.985074626865672No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT511.9029850746268655No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGT180.6716417910447761No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT140.5223880597014926No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT140.5223880597014926No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGTTGAAAGT80.2985074626865672No Hit
CGGCTGCGTTCTTCATCGATGCCGGAGCCAAGAGATCCATTGTTGAAAGT80.2985074626865672No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT70.2611940298507463No Hit
CGGCTGCGTTCTTCATCGATGCCAGGGCCAAGAGATCCGTTGTTGAAAGT70.2611940298507463No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGT60.22388059701492538No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAAAAGT60.22388059701492538No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGCAAGT50.18656716417910446No Hit
CGGCTGCGTTCTTCATCGATGCCAGGGCCAAGAGATCCATTGTTGAAAGT50.18656716417910446No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCGAGAGATCCGTTGTTGAAAGT50.18656716417910446No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGGGATCCGTTGTTGAAAGT50.18656716417910446No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGACCCGTTGTTGAAAGT50.18656716417910446No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGC50.18656716417910446No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGGGATCCATTGTTGAAAGT40.1492537313432836No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC40.1492537313432836No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAGAGT40.1492537313432836No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAACGT40.1492537313432836No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGGTCCATTGTTGAAAGT40.1492537313432836No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTCGTTGAAAGT40.1492537313432836No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCTGTTGTTGAAAGT40.1492537313432836No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCACTGTTGAAAGT40.1492537313432836No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGGTCCGTTGTTAAAAGT40.1492537313432836No Hit
CGGCTGCGTTCTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTT30.11194029850746269No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGCAAGT30.11194029850746269No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGT30.11194029850746269No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGCTGTTGAAAGT30.11194029850746269No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGC30.11194029850746269No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATTCGTTGTTGAAAGT30.11194029850746269No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGGGATCCGTTGTTAAAAGT30.11194029850746269No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATCGTTGAAAGT30.11194029850746269No Hit
CGGCTGCGTTCTTCATCGATGCTAGAGCCAAGAGATCCGTTGTTGAAAGT30.11194029850746269No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAACGT30.11194029850746269No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCTAAGAGATCCATTGTTGAAAGT30.11194029850746269No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)