FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n02_ITSChi382.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n02_ITSChi382.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4783
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT200641.940204892326996No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT68314.279740748484215No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT58212.168095337654192No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT2324.850512230817479No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT1924.014217018607569No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT1242.592515157850721No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT931.944386368388041No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT430.8990173531256535No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGT240.5017771273259461No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC190.3972402257997073No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGTTGAAAGT170.35542546518921175No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTAAAAGT140.29270332427346857No Hit
CGGCTGCGTTCTTCATCGATGCGGGAGCCAAGAGATCCGTTGTTAAAAGT130.2717959439682208No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTACAAGT130.2717959439682208No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTCGTTAAAAGT120.2508885636629731No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCCGAAAGT120.2508885636629731No Hit
CGGCTGCGTTCTTCATCGATGCAAGAGCCAAGAGATCCGTTGTTAAAAGT110.2299811833577253No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGT110.2299811833577253No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGC100.20907380305247752No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGCTGTTAAAAGT100.20907380305247752No Hit
CGGCTGCGTTCTTCATCGATGCGAGGGCCAAGAGATCCGTTGTTAAAAGT90.18816642274722975No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCGAGAGATCCGTTGTTAAAAGT80.167259042441982No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGACCCGTTGTTAAAAGT80.167259042441982No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGT70.14635166213673428No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAACGT70.14635166213673428No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAACAGT70.14635166213673428No Hit
CGGCTGCGTTCTTCATCGATGCGCGAGCCAAGAGATCCGTTGTTAAAAGT70.14635166213673428No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGGAAGT70.14635166213673428No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTAAAAGT70.14635166213673428No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAGGT70.14635166213673428No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAGGAGATCCGTTGTTAAAAGT60.12544428183148654No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAGAGT60.12544428183148654No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAGGT60.12544428183148654No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAAAAGT60.12544428183148654No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGAACCGTTGTTAAAAGT50.10453690152623876No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGCAAGT50.10453690152623876No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAGGT50.10453690152623876No Hit
CGGTTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT50.10453690152623876No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGACCCATTGTTGAAAGT50.10453690152623876No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCGAGAGATCCATTGTTGAAAGT50.10453690152623876No Hit
CGGCTGTGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT50.10453690152623876No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGTTAAAAGT50.10453690152623876No Hit
TGAGTAACCGCAACATAGTGAAAACACAGTTATCCATACTAGTTAGAGAA50.10453690152623876No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)